Sustainpine_db
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Assembly Name: biogeco3 v1.0

Name: red, far-red light phototransduction

Term: GO:0009585  Help

Source: GO from Blast2go

Ontology: Biological Process


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog3_v1.0_unigene806 biogeco3 v1.0 1104
AutoFact: Phytochrome n=1 Tax=Marchantia paleacea var. diptera RepID=Q9AVP3_MARPA 0.0
FL-Next: sp=Phytochrome; Pinus sylvestris (Scots pine). 0.0
Blast2go: phytochrome 0.0
C-terminus
biog3_v1.0_unigene2960 biogeco3 v1.0 986
AutoFact: Heme oxygenase 1 n=2 Tax=Pinaceae RepID=Q94FW5_PINTA 0.0
FL-Next: tr=Heme oxygenase 1; Pinus taeda (Loblolly pine). 0.0
Blast2go: heme oxygenase 1 protein 2 0.0
N-terminus
biog3_v1.0_unigene3814 biogeco3 v1.0 305
AutoFact: Phytochrome n=1 Tax=Marchantia paleacea var. diptera RepID=Q9AVP3_MARPA 0.0
FL-Next: sp=Phytochrome; Pinus sylvestris (Scots pine). 0.0
Blast2go: phytochrome 0.0
Internal
biog3_v1.0_unigene4752 biogeco3 v1.0 421
AutoFact: Phytochrome n=12 Tax=Pinaceae RepID=PHY_PICAB 0.0
FL-Next: sp=Phytochrome; Picea abies (Norway spruce) (Picea excelsa). 0.0
Blast2go: phytochrome o 0.0
Internal
biog3_v1.0_unigene4945 biogeco3 v1.0 372
AutoFact: Phytochrome n=12 Tax=Pinaceae RepID=PHY_PICAB 0.0
FL-Next: sp=Phytochrome; Picea abies (Norway spruce) (Picea excelsa). 0.0
Blast2go: phytochrome o 0.0
Internal
biog3_v1.0_unigene5307 biogeco3 v1.0 269
AutoFact: Phytochrome A-associated F-box protein, putative n=1 Tax=Ricinus communis RepID=B9SAQ8_RICCO 0.0
Blast2go: phytochrome a-associated f-box protein 0.0
Coding
biog3_v1.0_unigene8294 biogeco3 v1.0 1180
AutoFact: DNA repair protein xp-E, putative n=1 Tax=Ricinus communis RepID=B9SKT9_RICCO 0.0
FL-Next: sp=DNA damage-binding protein 1; cheesmanii). 0.0
Blast2go: dna damage-binding protein 1a 0.0
Internal
biog3_v1.0_unigene11677 biogeco3 v1.0 472
AutoFact: Nucleoside diphosphate kinase n=1 Tax=Ricinus communis RepID=B9RAM1_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: nucleoside diphosphate kinase 0.0
C-terminus
biog3_v1.0_unigene13891 biogeco3 v1.0 418
AutoFact: DNA repair protein xp-E, putative n=1 Tax=Ricinus communis RepID=B9SKT9_RICCO 0.0
FL-Next: sp=DNA damage-binding protein 1b; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: dna damage-binding protein 1a 0.0
Internal
biog3_v1.0_unigene14603 biogeco3 v1.0 159
AutoFact: Phytochrome n=43 Tax=Spermatophyta RepID=PHY_PINSY 0.0
FL-Next: sp=Phytochrome; Pinus sylvestris (Scots pine). 0.0
Blast2go: phytochrome p 0.0
Internal
biog3_v1.0_unigene15087 biogeco3 v1.0 266
AutoFact: DNA repair protein xp-E, putative n=1 Tax=Ricinus communis RepID=B9SKT9_RICCO 0.0
FL-Next: sp=DNA damage-binding protein 1; Solanum lycopersicum (Tomato) (Lycopersicon esculentum). 0.0
Blast2go: dna damage-binding protein 1a 0.0
Internal
biog3_v1.0_unigene15991 biogeco3 v1.0 164
AutoFact: Phytochrome A-associated F-box protein, putative n=1 Tax=Ricinus communis RepID=B9SAQ8_RICCO 0.0
Blast2go: phytochrome a-associated f-box protein 0.0
unknown
biog3_v1.0_unigene17740 biogeco3 v1.0 184
AutoFact: Phytochrome n=43 Tax=Spermatophyta RepID=PHY_PINSY 0.0
FL-Next: sp=Phytochrome; Pinus sylvestris (Scots pine). 0.0
Blast2go: phytochrome p 0.0
Internal
biog3_v1.0_unigene17778 biogeco3 v1.0 259
AutoFact: [R] COG2319 FOG: WD40 repeat 0.0001
Blast2go: photomorphogenesis repressor protein 0.0
unknown
biog3_v1.0_unigene19368 biogeco3 v1.0 211
AutoFact: Phytochrome n=1 Tax=Marchantia paleacea var. diptera RepID=Q9AVP3_MARPA 0.0
FL-Next: sp=Phytochrome; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: phytochrome 0.0
Internal
biog3_v1.0_unigene19665 biogeco3 v1.0 188
AutoFact: DNA repair protein xp-E, putative n=1 Tax=Ricinus communis RepID=B9SKT9_RICCO 0.0
Blast2go: dna damage-binding protein 1a 0.0
unknown
biog3_v1.0_unigene20202 biogeco3 v1.0 225
AutoFact: Nucleoside diphosphate kinase n=1 Tax=Ricinus communis RepID=B9RAM1_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: nucleoside diphosphate kinase 0.0
Internal
biog3_v1.0_unigene20416 biogeco3 v1.0 442
AutoFact: Phytochrome n=12 Tax=Pinaceae RepID=PHY_PICAB 0.0
FL-Next: sp=Phytochrome; Picea abies (Norway spruce) (Picea excelsa). 0.0
Blast2go: phytochrome 0.0
Internal
biog3_v1.0_unigene23746 biogeco3 v1.0 496
AutoFact: Phytochrome n=43 Tax=Spermatophyta RepID=PHY_PINSY 0.0
FL-Next: sp=Phytochrome; Pinus sylvestris (Scots pine). 0.0
Blast2go: phytochrome p 0.0
Internal
biog3_v1.0_unigene24555 biogeco3 v1.0 270
AutoFact: phytochrome and flowering time regulatory protein 1 [Arabidopsis thaliana] gb|AEE30640.1| phytochrome and flowering time regulatory protein 1 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: phytochrome and flowering time regulatory protein 1 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain