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Assembly Name: biogeco3 v1.0

Name: RNA modification

Term: GO:0009451  Help

Source: GO from Blast2go

Ontology: Biological Process


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog3_v1.0_unigene202 biogeco3 v1.0 706
AutoFact: pfam00300, His_Phos_1, Histidine phosphatase superfamily (branch 1) 1.0e-25
FL-Next: tr=Fructose-2,6-bisphosphatase; Zea mays (Maize). 0.0
Blast2go: fructose- -bisphosphatase 0.0
C-terminus
biog3_v1.0_unigene1206 biogeco3 v1.0 487
AutoFact: UPF0004 multi-domain protein 1.0e-24
FL-Next: tr=Putative uncharacterized protein; Oryza sativa subsp. indica (Rice). 0.0
Blast2go: cdk5 regulatory subunit-associated protein 1-like 1-like 0.0
Internal
biog3_v1.0_unigene1818 biogeco3 v1.0 299
AutoFact: putative CCR4-associated factor 1-7 [Arabidopsis thaliana] sp|Q9SKZ2.2|CAF1G_ARATH RecName: Full=Probable CCR4-associated factor 1 homolog 7 gb|AAK93623.1| putative CCR4-associated factor [Arabidopsis thaliana] gb|AAD15397.2| putative CCR4-associated fact 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ccr4-associated factor 0.0
Internal
biog3_v1.0_unigene2656 biogeco3 v1.0 265
AutoFact: Os07g0631900 protein n=2 Tax=Oryza sativa RepID=Q8LHN4_ORYSJ 3.00018e-42
Blast2go: 33 kda chloroplastic-like 0.0
unknown
biog3_v1.0_unigene2871 biogeco3 v1.0 929
AutoFact: UPF0004 multi-domain protein 1.0e-24
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: cdk5 regulatory subunit-associated protein 1-like 1-like 0.0
Putative N-terminus
biog3_v1.0_unigene7060 biogeco3 v1.0 1425
AutoFact: Os07g0631900 protein n=2 Tax=Oryza sativa RepID=Q8LHN4_ORYSJ 3.00018e-42
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 33 kda chloroplastic-like 0.0
Complete
biog3_v1.0_unigene7518 biogeco3 v1.0 277
AutoFact: Pseudouridylate synthase/ transporter n=1 Tax=Zea mays RepID=B6TRU2_MAIZE 0.0
FL-Next: tr=Pseudouridylate synthase/ transporter; Zea mays (Maize). 0.0
Blast2go: pseudouridylate synthase transporter 0.0
Putative C-terminus
biog3_v1.0_unigene9256 biogeco3 v1.0 544
AutoFact: Phosphoglycerate mutase, putative n=1 Tax=Ricinus communis RepID=B9RGZ7_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: fructose- -bisphosphatase 0.0
Internal
biog3_v1.0_unigene11031 biogeco3 v1.0 501
AutoFact: pfam00300, His_Phos_1, Histidine phosphatase superfamily (branch 1) 1.0e-25
FL-Next: tr=Putative fructose-2,6-bisphosphatase; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: fructose- -bisphosphatase 0.0
Internal
biog3_v1.0_unigene15080 biogeco3 v1.0 395
AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9SN39.1|PP320_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g18750, chloroplastic; Flags: Precursor emb|CAB37460.1| putative protein [Arabidopsis thaliana] emb|CAB 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pentatricopeptide repeat-containing protein 0.0
Internal
biog3_v1.0_unigene15949 biogeco3 v1.0 177
AutoFact: putative CCR4-associated factor 1-7 [Arabidopsis thaliana] sp|Q9SKZ2.2|CAF1G_ARATH RecName: Full=Probable CCR4-associated factor 1 homolog 7 gb|AAK93623.1| putative CCR4-associated factor [Arabidopsis thaliana] gb|AAD15397.2| putative CCR4-associated fact 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ccr4-associated factor 0.0
Internal
biog3_v1.0_unigene16991 biogeco3 v1.0 168
AutoFact: putative CCR4-associated factor 1-7 [Arabidopsis thaliana] sp|Q9SKZ2.2|CAF1G_ARATH RecName: Full=Probable CCR4-associated factor 1 homolog 7 gb|AAK93623.1| putative CCR4-associated factor [Arabidopsis thaliana] gb|AAD15397.2| putative CCR4-associated fact 0.0
Blast2go: ccr4-associated factor 0.0
unknown
biog3_v1.0_unigene17319 biogeco3 v1.0 306
AutoFact: Phosphoglycerate mutase, putative n=1 Tax=Ricinus communis RepID=B9RGZ7_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: fructose- -bisphosphatase 0.0
Internal
biog3_v1.0_unigene22087 biogeco3 v1.0 198
AutoFact: Phosphoglycerate mutase, putative n=1 Tax=Ricinus communis RepID=B9RGZ7_RICCO 0.0
Blast2go: fructose- -bisphosphatase 0.0
unknown
biog3_v1.0_unigene23715 biogeco3 v1.0 201
AutoFact: Os07g0631900 protein n=2 Tax=Oryza sativa RepID=Q8LHN4_ORYSJ 3.00018e-42
Blast2go: 33 kda chloroplastic-like 0.0
unknown
biog3_v1.0_unigene26151 biogeco3 v1.0 212
AutoFact: Pentatricopeptide repeat protein 77 n=1 Tax=Funaria hygrometrica RepID=F5CAE2_FUNHY 3.0e-09
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pentatricopeptide repeat-containing protein 1.08301e-11
Internal
biog3_v1.0_unigene26225 biogeco3 v1.0 243
AutoFact: Pentatricopeptide repeat-containing protein, putative n=1 Tax=Ricinus communis RepID=B9RRD9_RICCO 4.0e-37
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: chloroplast biogenesis 19 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain