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Assembly Name: biogeco3 v1.0

Name: protein transport

Term: GO:0015031  Help

Source: GO from Blast2go

Ontology: Biological Process


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog3_v1.0_unigene673 biogeco3 v1.0 344
AutoFact: exocyst complex component 4 [Arabidopsis thaliana] sp|Q93YU5.1|EXOC4_ARATH RecName: Full=Probable exocyst complex component 4; AltName: Full=Exocyst complex component Sec8; Short=AtSEC8 gb|AAL24111.1| unknown protein [Arabidopsis thaliana] dbj|BAC43144.1| 0.0
Blast2go: probable exocyst complex component 4-like 0.0
unknown
biog3_v1.0_unigene775 biogeco3 v1.0 505
AutoFact: pfam02296, Alpha_adaptin_C, Alpha adaptin AP2, C-terminal domain 8.0e-16
FL-Next: sp=AP-2 complex subunit alpha-1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: ap-2 complex subunit alpha-1 0.0
Internal
biog3_v1.0_unigene968 biogeco3 v1.0 1250
AutoFact: Rac-like GTP binding protein n=1 Tax=Picea mariana RepID=O65062_PICMA 0.0
FL-Next: tr=Rac-like GTP binding protein; Picea mariana (Black spruce) (Abies mariana). 0.0
Blast2go: rop-family small gtpase 0.0
Putative Complete
biog3_v1.0_unigene1028 biogeco3 v1.0 617
AutoFact: brefeldin A-sensitive Golgi protein-like [Arabidopsis thaliana] emb|CAB79394.1| brefeldin A-sensitive Golgi protein-like [Arabidopsis thaliana] 0.0
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: conserved oligomeric golgi complex subunit 0.0
Internal
biog3_v1.0_unigene1761 biogeco3 v1.0 286
AutoFact: solute carrier family 15 (H+/peptide transporter), member 2, isoform CRA_a [Mus musculus] 1.0e-16
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: cre-opt-1 protein 2.45458e-30
Internal
biog3_v1.0_unigene3062 biogeco3 v1.0 1252
AutoFact: Protein translocase, putative n=1 Tax=Ricinus communis RepID=B9S0U8_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Complete
biog3_v1.0_unigene3470 biogeco3 v1.0 350
AutoFact: Tim17/Tim22/Tim23 pre-protein translocase of the mitochondrial outer membrane domain-containing protein [Arabidopsis thaliana] gb|AAK95309.1|AF410323_1 AT4g26670/F10M23_10 [Arabidopsis thaliana] gb|AAM26699.1| AT4g26670/F10M23_10 [Arabidopsis thaliana] gb 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Putative N-terminus
biog3_v1.0_unigene3603 biogeco3 v1.0 1764
AutoFact: GDP dissociation inhibitor 1-like [Solanum tuberosum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: gdp dissociation inhibitor 0.0
Complete
biog3_v1.0_unigene3780 biogeco3 v1.0 889
AutoFact: RecName: Full=Cysteine protease ATG4B; AltName: Full=Autophagy-related protein 4 homolog B; Short=Protein autophagy 4; AltName: Full=OsAtg4 0.0
FL-Next: sp=Cysteine protease ATG4A; Oryza sativa subsp. indica (Rice). 0.0
Blast2go: cysteine protease atg4-like 0.0
C-terminus
biog3_v1.0_unigene4352 biogeco3 v1.0 285
AutoFact: PREDICTED: similar to guanine nucleotide regulatory protein n=1 Tax=Vitis vinifera RepID=UPI0001985FCE 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ras-related protein raba5a-like 0.0
C-terminus
biog3_v1.0_unigene4385 biogeco3 v1.0 910
AutoFact: Rab2/RabB-family small GTPase n=4 Tax=Physcomitrella patens subsp. patens RepID=A9SC62_PHYPA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rab2 -family small gtpase 0.0
Complete
biog3_v1.0_unigene4477 biogeco3 v1.0 469
AutoFact: translocase inner membrane subunit 23-2 [Arabidopsis thaliana] gb|AAG51855.1|AC010926_18 inner mitochondrial membrane protein; 26940-26374 [Arabidopsis thaliana] gb|AAA57314.1| inner mitochondrial membrane protein [Arabidopsis thaliana] gb|AAK68832.1| inn 8.00141e-43
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: mitochondrial import inner membrane translocase subunit tim23-like 0.0
C-terminus
biog3_v1.0_unigene4820 biogeco3 v1.0 731
AutoFact: Protein translocase subunit secA (Fragment) n=2 Tax=Vitis vinifera RepID=E0CR18_VITVI 0.0
FL-Next: sp=Protein translocase subunit SecA; Gracilaria tenuistipitata var. liui (Red alga). Plastid; Chloroplast. 0.0
Blast2go: preprotein translocase seca-like protein 0.0
Internal
biog3_v1.0_unigene4943 biogeco3 v1.0 206
AutoFact: vacuolar protein sorting-associated protein 20-2 [Arabidopsis thaliana] sp|Q9FY89.1|VP202_ARATH RecName: Full=Vacuolar protein sorting-associated protein 20 homolog 2; Short=AtVPS20-2; AltName: Full=Charged multivesicular body protein 6 homolog 2; AltName 0.0
Blast2go: snf7 family protein 0.0
Putative coding
biog3_v1.0_unigene4979 biogeco3 v1.0 917
AutoFact: GTPase Rab1 n=3 Tax=Pinaceae RepID=B0LXL9_9CONI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rab family gtpase 0.0
Complete
biog3_v1.0_unigene5367 biogeco3 v1.0 463
AutoFact: pfam02296, Alpha_adaptin_C, Alpha adaptin AP2, C-terminal domain 8.0e-16
FL-Next: sp=AP-2 complex subunit alpha-2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: ap-2 complex subunit alpha-1 0.0
Internal
biog3_v1.0_unigene6432 biogeco3 v1.0 545
AutoFact: vacuolar protein sorting-associated protein 24-1 [Arabidopsis thaliana] sp|Q9FFB3.1|VP241_ARATH RecName: Full=Vacuolar protein sorting-associated protein 24 homolog 1; Short=AtVPS24-1; AltName: Full=Charged multivesicular body protein 3 homolog 1; AltName 0.0
Blast2go: vacuolar protein sorting-associated protein 24 homolog 1-like 0.0
unknown
biog3_v1.0_unigene6731 biogeco3 v1.0 639
AutoFact: exocyst complex component 4 [Arabidopsis thaliana] sp|Q93YU5.1|EXOC4_ARATH RecName: Full=Probable exocyst complex component 4; AltName: Full=Exocyst complex component Sec8; Short=AtSEC8 gb|AAL24111.1| unknown protein [Arabidopsis thaliana] dbj|BAC43144.1| 0.0
FL-Next: sp=Probable exocyst complex component 4; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: probable exocyst complex component 4-like 0.0
Internal
biog3_v1.0_unigene6826 biogeco3 v1.0 644
AutoFact: mitochondrial import inner membrane translocase subunit Tim17 [Arabidopsis thaliana] ref|NP_973621.1| mitochondrial import inner membrane translocase subunit Tim17 [Arabidopsis thaliana] sp|Q9SP35.2|TIM17_ARATH RecName: Full=Mitochondrial import inner mem 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: mitochondrial import inner membrane translocase subunit tim17 0.0
C-terminus
biog3_v1.0_unigene7746 biogeco3 v1.0 516
AutoFact: RecName: Full=Cysteine protease ATG4B; AltName: Full=Autophagy-related protein 4 homolog B; Short=Protein autophagy 4; AltName: Full=OsAtg4 0.0
FL-Next: Isoform 2 of Cysteine protease ATG4b OS=Arabidopsis thaliana GN=ATG4B 0.0
Blast2go: cysteine protease atg4-like 0.0
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain