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Assembly Name: biogeco3 v1.0

Name: protein transport

Term: GO:0015031  Help

Source: GO from Blast2go

Ontology: Biological Process

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
biog3_v1.0_unigene7885 biogeco3 v1.0 909
• AutoFact: Tim17 domain-containing protein n=3 Tax=Arabidopsis RepID=F4IMZ5_ARATH 9.0e-33
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: tim17 domain-containing protein 0.0
Complete
biog3_v1.0_unigene7989 biogeco3 v1.0 872
• AutoFact: vacuolar protein sorting-associated protein 24-1 [Arabidopsis thaliana] sp|Q9FFB3.1|VP241_ARATH RecName: Full=Vacuolar protein sorting-associated protein 24 homolog 1; Short=AtVPS24-1; AltName: Full=Charged multivesicular body protein 3 homolog 1; AltName 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: vacuolar protein sorting-associated protein 24 homolog 1-like 0.0
Putative Complete
biog3_v1.0_unigene8563 biogeco3 v1.0 886
• AutoFact: GTPase [Glycine max] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: ras-related protein raba5d-like 0.0
Complete
biog3_v1.0_unigene8585 biogeco3 v1.0 207
• AutoFact: vacuolar protein sorting-associated protein 20-2 [Arabidopsis thaliana] sp|Q9FY89.1|VP202_ARATH RecName: Full=Vacuolar protein sorting-associated protein 20 homolog 2; Short=AtVPS20-2; AltName: Full=Charged multivesicular body protein 6 homolog 2; AltName 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: snf7 family protein 0.0
Putative N-terminus
biog3_v1.0_unigene8747 biogeco3 v1.0 253
• AutoFact: ADP-ribosylation factor 3 n=21 Tax=Magnoliophyta RepID=ARF3_ARATH 0.0
• Blast2go: adp-ribosylation factor 3 0.0
unknown
biog3_v1.0_unigene8796 biogeco3 v1.0 354
• AutoFact: pfam02296, Alpha_adaptin_C, Alpha adaptin AP2, C-terminal domain 8.0e-16
• Blast2go: ap-2 complex subunit alpha-1 0.0
unknown
biog3_v1.0_unigene9023 biogeco3 v1.0 346
• AutoFact: PREDICTED: similar to guanine nucleotide regulatory protein n=1 Tax=Vitis vinifera RepID=UPI0001985FCE 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: ras-related protein raba5a-like 0.0
N-terminus
biog3_v1.0_unigene9563 biogeco3 v1.0 991
• AutoFact: Ras-related protein Rab-18 n=4 Tax=Poaceae RepID=B6TCF9_MAIZE 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: ras-related protein rab-18 0.0
Complete
biog3_v1.0_unigene10304 biogeco3 v1.0 1549
• AutoFact: Rab family GTPase n=3 Tax=Selaginella moellendorffii RepID=D8RE14_SELML 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: rab family gtpase 0.0
Complete
biog3_v1.0_unigene10397 biogeco3 v1.0 944
• AutoFact: ER lumen protein retaining receptor family protein [Arabidopsis thaliana] gb|AAM63347.1| putative ER lumen protein retaining receptor [Arabidopsis thaliana] dbj|BAF01240.1| hypothetical protein [Arabidopsis thaliana] gb|AEE86975.1| ER lumen protein retain 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: er lumen protein retaining receptor 0.0
C-terminus
biog3_v1.0_unigene10516 biogeco3 v1.0 219
• AutoFact: pfam02296, Alpha_adaptin_C, Alpha adaptin AP2, C-terminal domain 8.0e-16
• FL-Next: sp=AP-2 complex subunit alpha-2; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: ap-2 complex subunit alpha-1 0.0
Internal
biog3_v1.0_unigene10534 biogeco3 v1.0 674
• AutoFact: vacuolar protein sorting-associated protein 20-2 [Arabidopsis thaliana] sp|Q9FY89.1|VP202_ARATH RecName: Full=Vacuolar protein sorting-associated protein 20 homolog 2; Short=AtVPS20-2; AltName: Full=Charged multivesicular body protein 6 homolog 2; AltName 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: snf7 family protein 0.0
C-terminus
biog3_v1.0_unigene10880 biogeco3 v1.0 969
• AutoFact: Rab1/RabD-family small GTPase n=7 Tax=Embryophyta RepID=A9SLS3_PHYPA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: rab family gtpase 0.0
Complete
biog3_v1.0_unigene10883 biogeco3 v1.0 295
• AutoFact: RecName: Full=Cysteine protease ATG4B; AltName: Full=Autophagy-related protein 4 homolog B; Short=Protein autophagy 4; AltName: Full=OsAtg4 0.0
• Blast2go: cysteine protease atg4-like 0.0
unknown
biog3_v1.0_unigene11091 biogeco3 v1.0 629
• AutoFact: Nascent polypeptide-associated complex subunit alpha-like protein n=2 Tax=Pinaceae RepID=NACA_PINTA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: nascent polypeptide-associated complex subunit alpha-like 0.0
C-terminus
biog3_v1.0_unigene11645 biogeco3 v1.0 789
• AutoFact: ADP-ribosylation factor 3 n=21 Tax=Magnoliophyta RepID=ARF3_ARATH 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: adp-ribosylation factor 3 0.0
Complete
biog3_v1.0_unigene11911 biogeco3 v1.0 1039
• AutoFact: Autophagy-related protein 3 n=1 Tax=Picea sitchensis RepID=A9NVL1_PICSI 0.0
• FL-Next: sp=Autophagy-related protein 3; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: autophagy-related protein 3 0.0
C-terminus
biog3_v1.0_unigene12027 biogeco3 v1.0 312
• AutoFact: Ras-related protein Rab-2-B n=15 Tax=Magnoliophyta RepID=RAB2B_MAIZE 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: ras-related protein rab-2-a 0.0
N-terminus
biog3_v1.0_unigene12203 biogeco3 v1.0 1109
• AutoFact: RecName: Full=GTP-binding nuclear protein Ran-A1 gb|AAA73563.1| GTP-binding protein [Nicotiana tabacum] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: gtp-binding nuclear protein ran-3-like 0.0
Complete
biog3_v1.0_unigene13119 biogeco3 v1.0 439
• AutoFact: vacuolar protein sorting-associated protein 20-2 [Arabidopsis thaliana] sp|Q9FY89.1|VP202_ARATH RecName: Full=Vacuolar protein sorting-associated protein 20 homolog 2; Short=AtVPS20-2; AltName: Full=Charged multivesicular body protein 6 homolog 2; AltName 0.0
• Blast2go: snf7 family protein 0.0
unknown

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain