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Assembly Name: biogeco3 v1.0

Name: carotenoid biosynthetic process

Term: GO:0016117  Help

Source: GO from Blast2go

Ontology: Biological Process


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog3_v1.0_unigene131 biogeco3 v1.0 768
AutoFact: Phytoene synthase n=1 Tax=Salicornia europaea RepID=A1KYX8_SALEU 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: phytoene synthase 0.0
C-terminus
biog3_v1.0_unigene293 biogeco3 v1.0 779
AutoFact: Homogentisate phytyltransferase 2, chloroplastic n=3 Tax=Arabidopsis RepID=HPT2_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: homogentisate solanesyltransferase 0.0
Internal
biog3_v1.0_unigene321 biogeco3 v1.0 894
AutoFact: Zeta carotene desaturase n=2 Tax=Daucus carota subsp. sativus RepID=Q2VER6_DAUCA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: zeta-carotene desaturase 0.0
Internal
biog3_v1.0_unigene3870 biogeco3 v1.0 298
AutoFact: Putative lycopene epsilon cyclase n=1 Tax=Daucus carota subsp. sativus RepID=Q2VEX5_DAUCA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: lycopene epsilon cyclase 0.0
Internal
biog3_v1.0_unigene4830 biogeco3 v1.0 524
AutoFact: Putative lycopene beta cyclase n=38 Tax=Cupressaceae RepID=Q403Q1_TAXDI 0.0
FL-Next: tr=Putative lycopene beta cyclase; Taxodium distichum var. imbricarium. 0.0
Blast2go: lycopene beta cyclase 0.0
C-terminus
biog3_v1.0_unigene5429 biogeco3 v1.0 354
AutoFact: Alternative oxidase n=1 Tax=Picea sitchensis RepID=A9NQ56_PICSI 0.0
FL-Next: sp=Alternative oxidase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: immutans protein 0.0
Internal
biog3_v1.0_unigene5535 biogeco3 v1.0 407
AutoFact: Lycopene epsilon-cyclase n=2 Tax=Adonis aestivalis var. palaestina RepID=Q9AXK9_9MAGN 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: lycopene epsilon cyclase 0.0
Internal
biog3_v1.0_unigene6081 biogeco3 v1.0 860
AutoFact: Zeta carotene desaturase n=2 Tax=Daucus carota subsp. sativus RepID=Q2VER6_DAUCA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: zeta-carotene desaturase 0.0
C-terminus
biog3_v1.0_unigene7141 biogeco3 v1.0 684
AutoFact: Alternative oxidase n=1 Tax=Picea sitchensis RepID=A9NQ56_PICSI 0.0
FL-Next: sp=Alternative oxidase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: immutans protein 0.0
N-terminus
biog3_v1.0_unigene7285 biogeco3 v1.0 1782
AutoFact: 4-hydroxyphenylpyruvate dioxygenase [Arabidopsis thaliana] gb|AAF24813.1|AC007592_6 F12K11.9 [Arabidopsis thaliana] gb|AEE28006.1| 4-hydroxyphenylpyruvate dioxygenase [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 4-hydroxyphenylpyruvate dioxygenase 0.0
Complete
biog3_v1.0_unigene8770 biogeco3 v1.0 369
AutoFact: Zeta carotene desaturase n=2 Tax=Daucus carota subsp. sativus RepID=Q2VER6_DAUCA 0.0
Blast2go: zeta-carotene desaturase 0.0
unknown
biog3_v1.0_unigene11372 biogeco3 v1.0 794
AutoFact: Phytoene synthase n=1 Tax=Salicornia europaea RepID=A1KYX8_SALEU 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: phytoene synthase 0.0
N-terminus
biog3_v1.0_unigene12248 biogeco3 v1.0 627
AutoFact: phytoene synthase [Salicornia europaea] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: phytoene synthase 0.0
Internal
biog3_v1.0_unigene15300 biogeco3 v1.0 430
AutoFact: Carotenoid epsilon-ring hydroxylase n=3 Tax=Arabidopsis RepID=Q6TBX7_ARATH 0.0
FL-Next: sp=Cytochrome P450 704C1; Pinus taeda (Loblolly pine). 0.0
Blast2go: carotene epsilon- chloroplastic-like 0.0
Internal
biog3_v1.0_unigene15516 biogeco3 v1.0 322
AutoFact: Cinnamoyl CoA reductase n=5 Tax=Populus trichocarpa RepID=B9GMB5_POPTR 0.0
FL-Next: tr=Cinnamoyl-CoA reductase; Pinus taeda (Loblolly pine). 0.0
Blast2go: cinnamoyl reductase 0.0
Internal
biog3_v1.0_unigene16095 biogeco3 v1.0 216
AutoFact: Phytoene synthase n=1 Tax=Salicornia europaea RepID=A1KYX8_SALEU 0.0
Blast2go: phytoene synthase 0.0
unknown
biog3_v1.0_unigene16119 biogeco3 v1.0 289
AutoFact: Alternative oxidase n=1 Tax=Picea sitchensis RepID=A9NQ56_PICSI 0.0
FL-Next: sp=Alternative oxidase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: immutans protein 0.0
C-terminus
biog3_v1.0_unigene16362 biogeco3 v1.0 246
AutoFact: phytoene synthase [Salicornia europaea] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: phytoene synthase 0.0
C-terminus
biog3_v1.0_unigene21861 biogeco3 v1.0 320
AutoFact: RecName: Full=Carotenoid isomerase, chloroplastic; Short=CrtISO; AltName: Full=Protein tangerine; Flags: Precursor gb|AAL91366.1|AF416727_1 carotenoid isomerase [Solanum lycopersicum] 0.0
FL-Next: sp=Carotenoid isomerase, chloroplastic; Solanum lycopersicum (Tomato) (Lycopersicon esculentum). 0.0
Blast2go: carotenoid isomerase 0.0
Internal
biog3_v1.0_unigene21976 biogeco3 v1.0 375
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: atp binding 9.6872e-32
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain