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Assembly Name: biogeco3 v1.0

Name: plastid chromosome

Term: GO:0009508  Help

Source: GO from Blast2go

Ontology: Cellular Component


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog3_v1.0_unigene19059 biogeco3 v1.0 248
AutoFact: plastid transcriptionally active 12 [Arabidopsis thaliana] gb|AEC09002.1| plastid transcriptionally active 12 [Arabidopsis thaliana] 3.0e-22
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: plastid transcriptionally active 12 4.93397e-42
C-terminus
biog3_v1.0_unigene19752 biogeco3 v1.0 288
AutoFact: plastid transcriptionally active 12 [Arabidopsis thaliana] gb|AEC09002.1| plastid transcriptionally active 12 [Arabidopsis thaliana] 4.0e-23
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: plastid transcriptionally active 12 0.0
Internal
biog3_v1.0_unigene20237 biogeco3 v1.0 201
AutoFact: protein plastid transcriptionally active 16 [Arabidopsis thaliana] emb|CAB51187.1| putative protein [Arabidopsis thaliana] gb|AEE78204.1| protein plastid transcriptionally active 16 [Arabidopsis thaliana] 0.0
Blast2go: protein plastid transcriptionally active 16 0.0
unknown
biog3_v1.0_unigene21356 biogeco3 v1.0 231
AutoFact: plastid transcriptionally active 17 protein [Arabidopsis thaliana] gb|AAF27129.1|AC018849_17 hypothetical protein; 58060-60358 [Arabidopsis thaliana] gb|AAT47799.1| At1g80480 [Arabidopsis thaliana] gb|AAU05519.1| At1g80480 [Arabidopsis thaliana] gb|AEE364 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: cobw domain-containing protein 2-like isoform 2 0.0
N-terminus
biog3_v1.0_unigene21848 biogeco3 v1.0 280
AutoFact: plastid transcriptionally active 2 [Arabidopsis thaliana] sp|Q9S7Q2.1|PP124_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g74850, chloroplastic; AltName: Full=Protein PLASTID TRANSCRIPTIONALLY ACTIVE 2; Flags: Precursor gb|AAD55291.1| 0.0
FL-Next: sp=Pentatricopeptide repeat-containing protein At1g74850, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein 0.0
Internal
biog3_v1.0_unigene23769 biogeco3 v1.0 457
AutoFact: plastid transcriptionally active 2 [Arabidopsis thaliana] sp|Q9S7Q2.1|PP124_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g74850, chloroplastic; AltName: Full=Protein PLASTID TRANSCRIPTIONALLY ACTIVE 2; Flags: Precursor gb|AAD55291.1| 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Internal
biog3_v1.0_unigene25163 biogeco3 v1.0 391
AutoFact: plastid transcriptionally active 15 protein [Arabidopsis thaliana] dbj|BAB11580.1| unnamed protein product [Arabidopsis thaliana] gb|AAL91232.1| unknown protein [Arabidopsis thaliana] gb|AAN15573.1| unknown protein [Arabidopsis thaliana] gb|AED96463.1| pl 2.0e-15
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: mitochondrial transcription termination factor family protein 3.33974e-19
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain