|
Sequence
|
Assembly
|
Length (nt)
|
|
Full-Length
|
|
biog3_v1.0_unigene348
|
biogeco3 v1.0
|
330
|
|
• AutoFact: Transcription factor IIA, alpha/beta subunit [Arabidopsis thaliana] ref|NP_172228.3| Transcription factor IIA, alpha/beta subunit [Arabidopsis thaliana] emb|CAA11525.1| transcription factor IIA large subunit [Arabidopsis thaliana] gb|AAR28029.1| TFIIA-L1
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: transcription factor transcription initiation factor
|
0.0
|
|
Internal
|
|
biog3_v1.0_unigene1461
|
biogeco3 v1.0
|
646
|
|
• AutoFact: putative transcription initiation factor [Oryza sativa Japonica Group] gb|ABB46979.1| mutant TFIIF-alpha, putative, expressed [Oryza sativa Japonica Group]
|
2.0e-32
|
|
• FL-Next: Isoform 2 of Transcription initiation factor IIF subunit alpha OS=Arabidopsis thaliana GN=RAP74
|
0.0
|
|
• Blast2go: transcription initiation factor iif subunit alpha
|
7.42688e-44
|
|
C-terminus
|
|
biog3_v1.0_unigene3176
|
biogeco3 v1.0
|
1129
|
|
• AutoFact: Transcription factor IIA, alpha/beta subunit [Arabidopsis thaliana] ref|NP_172228.3| Transcription factor IIA, alpha/beta subunit [Arabidopsis thaliana] emb|CAA11525.1| transcription factor IIA large subunit [Arabidopsis thaliana] gb|AAR28029.1| TFIIA-L1
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: transcription factor transcription initiation factor
|
0.0
|
|
Putative C-terminus
|
|
biog3_v1.0_unigene5082
|
biogeco3 v1.0
|
329
|
|
• AutoFact: DNA-directed RNA polymerase (Fragment) n=1 Tax=Spinacia oleracea RepID=Q5D868_SPIOL
|
9.94922e-44
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: protein dcl
|
0.0
|
|
Internal
|
|
biog3_v1.0_unigene6692
|
biogeco3 v1.0
|
1303
|
|
• AutoFact: ribosomal protein L1p/L10e family protein [Arabidopsis thaliana] emb|CAB88283.1| putative protein [Arabidopsis thaliana] gb|AAL49900.1| unknown protein [Arabidopsis thaliana] gb|AEE79812.1| ribosomal protein L1p/L10e family protein [Arabidopsis thaliana]
|
1.0e-28
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: ribosomal l1 domain-containing protein 1-like
|
0.0
|
|
Putative Complete
|
|
biog3_v1.0_unigene7685
|
biogeco3 v1.0
|
382
|
|
• AutoFact: protein kinase family protein [Arabidopsis thaliana] gb|AAK43919.1|AF370600_1 putative protein kinase [Arabidopsis thaliana] gb|AAB80675.1| putative protein kinase [Arabidopsis thaliana] gb|ACI49790.1| At2g33580 [Arabidopsis thaliana] gb|AEC08855.1| prote
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: protein
|
0.0
|
|
Internal
|
|
biog3_v1.0_unigene11764
|
biogeco3 v1.0
|
483
|
|
• AutoFact: SRI domain containing protein
|
2.0e-05
|
|
• Blast2go: zinc finger ccch domain-containing protein
|
0.0
|
|
Coding
|
|
biog3_v1.0_unigene11834
|
biogeco3 v1.0
|
309
|
|
• AutoFact: PREDICTED: similar to synaptotagmin binding, cytoplasmic RNA interacting protein, isoform 1 [Ornithorhynchus anatinus]
|
3.0e-31
|
|
• FL-Next: tr=Putative uncharacterized protein; Zea mays (Maize).
|
0.0
|
|
• Blast2go: heterogeneous nuclear ribonucleoprotein q
|
0.0
|
|
Internal
|
|
biog3_v1.0_unigene12065
|
biogeco3 v1.0
|
1373
|
|
• AutoFact: RecName: Full=60S acidic ribosomal protein P0 gb|AAB63814.1| acidic ribosomal protein P0 [Glycine max]
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: 60s acidic ribosomal protein p0
|
0.0
|
|
Complete
|
|
biog3_v1.0_unigene12257
|
biogeco3 v1.0
|
352
|
|
• AutoFact: RecName: Full=60S acidic ribosomal protein P0 gb|AAB63814.1| acidic ribosomal protein P0 [Glycine max]
|
0.0
|
|
• Blast2go: 60s acidic ribosomal protein p0
|
0.0
|
|
unknown
|
|
biog3_v1.0_unigene15954
|
biogeco3 v1.0
|
320
|
|
• AutoFact: Transcription factor IIA, alpha/beta subunit [Arabidopsis thaliana] ref|NP_172228.3| Transcription factor IIA, alpha/beta subunit [Arabidopsis thaliana] emb|CAA11525.1| transcription factor IIA large subunit [Arabidopsis thaliana] gb|AAR28029.1| TFIIA-L1
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: transcription factor transcription initiation factor
|
0.0
|
|
Putative N-terminus
|
|
biog3_v1.0_unigene16229
|
biogeco3 v1.0
|
239
|
|
• AutoFact: SRI domain containing protein
|
2.0e-05
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: zinc finger ccch domain-containing protein
|
0.0
|
|
Internal
|
|
biog3_v1.0_unigene20890
|
biogeco3 v1.0
|
393
|
|
• AutoFact: PREDICTED: u7 snRNA-associated Sm-like protein LSm10-like [Monodelphis domestica]
|
6.0e-07
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: u7 small nuclear rna associated
|
0.0
|
|
C-terminus
|
|
biog3_v1.0_unigene24811
|
biogeco3 v1.0
|
1181
|
|
• AutoFact: PREDICTED: similar to synaptotagmin binding, cytoplasmic RNA interacting protein, isoform 1 [Ornithorhynchus anatinus]
|
3.0e-31
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: heterogeneous nuclear ribonucleoprotein q
|
0.0
|
|
Complete
|
|
biog3_v1.0_unigene26656
|
biogeco3 v1.0
|
417
|
|
• AutoFact: RecName: Full=60S acidic ribosomal protein P0 gb|AAB63814.1| acidic ribosomal protein P0 [Glycine max]
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: 60s acidic ribosomal protein p0
|
0.0
|
|
Internal
|
