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Assembly Name: biogeco3 v1.0

Name: RNA metabolic process

Term: GO:0016070  Help

Source: GO from Blast2go

Ontology: Biological Process


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog3_v1.0_unigene19910 biogeco3 v1.0 250
AutoFact: [L] COG4581 Superfamily II RNA helicase 1.96182e-44
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: superkiller viralicidic activity 2-like 2-like 0.0
Internal
biog3_v1.0_unigene20191 biogeco3 v1.0 204
AutoFact: Initiation factor eIF-4 gamma, middle; Up-frameshift suppressor 2 [Medicago truncatula] 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: regulator of nonsense transcripts 2-like 0.0
Internal
biog3_v1.0_unigene20585 biogeco3 v1.0 314
AutoFact: Initiation factor eIF-4 gamma, middle; Up-frameshift suppressor 2 [Medicago truncatula] 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: regulator of nonsense transcripts 2-like 0.0
Internal
biog3_v1.0_unigene20890 biogeco3 v1.0 393
AutoFact: PREDICTED: u7 snRNA-associated Sm-like protein LSm10-like [Monodelphis domestica] 6.0e-07
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: u7 small nuclear rna associated 0.0
C-terminus
biog3_v1.0_unigene21424 biogeco3 v1.0 296
AutoFact: Eukaryotic translation initiation factor 4G n=2 Tax=Carica papaya RepID=E3V0H9_CARPA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: translation initiation factor eif-4f 0.0
Internal
biog3_v1.0_unigene21504 biogeco3 v1.0 221
AutoFact: Eukaryotic translation initiation factor 4G n=2 Tax=Carica papaya RepID=E3V0H9_CARPA 0.0
Blast2go: translation initiation factor eif-4f 0.0
unknown
biog3_v1.0_unigene24880 biogeco3 v1.0 209
AutoFact: Ubiquitin-60S ribosomal protein L40-1 n=69 Tax=Eukaryota RepID=RL40A_ARATH 0.0
Blast2go: ubiquitin fusion protein 0.0
unknown
biog3_v1.0_unigene25076 biogeco3 v1.0 48
AutoFact: eukaryotic translation initiation factor 5 [Zea mays] 0.0
Blast2go: eukaryotic translation initiation factor 5 0.0
unknown
biog3_v1.0_unigene25226 biogeco3 v1.0 247
AutoFact: Ubiquitin-60S ribosomal protein L40-1 n=69 Tax=Eukaryota RepID=RL40A_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ubiquitin a-52 residue ribosomal protein fusion product 1 0.0
C-terminus
biog3_v1.0_unigene25847 biogeco3 v1.0 415
AutoFact: translation initiation factor eIF-2B epsilon subunit [Arabidopsis thaliana] gb|AAC12836.1| putative translation initiation factor eIF-2B epsilon subunit [Arabidopsis thaliana] gb|AAM98194.1| putative translation initiation factor eIF-2B epsilon subunit [A 0.0
FL-Next: tr=eIF4-gamma/eIF5/eIF2-epsilon domain-containing protein; Arabidopsis lyrata subsp. lyrata (Lyre-leaved rock-cress). 0.0
Blast2go: translation initiation factor eif-2b epsilon subunit 0.0
Internal
biog3_v1.0_unigene26127 biogeco3 v1.0 203
AutoFact: Ubiquitin-60S ribosomal protein L40-1 n=69 Tax=Eukaryota RepID=RL40A_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ubiquitin a-52 residue ribosomal protein fusion product 1 0.0
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain