Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: biogeco3 v1.0

Name: intracellular

Term: GO:0005622  Help

Source: GO from Blast2go

Ontology: Cellular Component


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog3_v1.0_unigene8 biogeco3 v1.0 499
AutoFact: WS01018.B21_E24 SS-R-N-A-11 Picea sitchensis cDNA clone WS01018_E24 3', mRNA sequence. 0.0
FL-Next: tr=Putative uncharacterized protein; Ricinus communis (Castor bean). 0.0
Blast2go: uncharacterized protein 0.0
Internal
biog3_v1.0_unigene42 biogeco3 v1.0 1510
AutoFact: CRAL_TRIO multi-domain protein 3.0e-11
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: polyphosphoinositide binding protein ssh1p 0.0
Complete
biog3_v1.0_unigene74 biogeco3 v1.0 1048
AutoFact: pfam01612, DNA_pol_A_exo1, 3'-5' exonuclease 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rrp6-like protein 1 0.0
Putative Complete
biog3_v1.0_unigene119 biogeco3 v1.0 670
AutoFact: Ribosomal protein L17 family protein [Arabidopsis thaliana] gb|AAM64301.1| ribsomal protein-like [Arabidopsis thaliana] gb|AAO24540.1| At5g09770 [Arabidopsis thaliana] dbj|BAF00072.1| ribsomal protein - like [Arabidopsis thaliana] gb|AED91444.1| Ribosomal 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ribosomal protein l17 family protein 0.0
Complete
biog3_v1.0_unigene177 biogeco3 v1.0 689
AutoFact: putative GTPase activator protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
N-terminus
biog3_v1.0_unigene253 biogeco3 v1.0 514
AutoFact: RabGAP/TBC domain-containing protein [Arabidopsis thaliana] dbj|BAD44199.1| GTPase activator protein of Rab-like small GTPases-like protein [Arabidopsis thaliana] gb|AED94745.1| RabGAP/TBC domain-containing protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: gtpase-activating protein gyp7-like 0.0
Internal
biog3_v1.0_unigene349 biogeco3 v1.0 389
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: unknown [Picea sitchensis] 0.0
Internal
biog3_v1.0_unigene419 biogeco3 v1.0 823
AutoFact: RabGAP/TBC domain-containing protein [Arabidopsis thaliana] dbj|BAD44199.1| GTPase activator protein of Rab-like small GTPases-like protein [Arabidopsis thaliana] gb|AED94745.1| RabGAP/TBC domain-containing protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: gtpase-activating protein gyp7-like 0.0
Internal
biog3_v1.0_unigene552 biogeco3 v1.0 407
AutoFact: pfam01612, DNA_pol_A_exo1, 3'-5' exonuclease 0.0
Blast2go: rrp6-like protein 1 0.0
unknown
biog3_v1.0_unigene584 biogeco3 v1.0 387
AutoFact: E3 ubiquitin-protein ligase UPL5 [Arabidopsis thaliana] sp|Q9SU29.1|UPL5_ARATH RecName: Full=E3 ubiquitin-protein ligase UPL5; Short=Ubiquitin-protein ligase 5 emb|CAB41727.2| polyubiquitin-like protein [Arabidopsis thaliana] emb|CAB78300.1| polyubiquitin 0.0
FL-Next: sp=E3 ubiquitin-protein ligase UPL5; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: e3 ubiquitin-protein ligase upl5 0.0
Internal
biog3_v1.0_unigene816 biogeco3 v1.0 388
AutoFact: putative E3 ubiquitin-protein ligase ARI8 [Arabidopsis thaliana] sp|Q8W468.1|ARI8_ARATH RecName: Full=Probable E3 ubiquitin-protein ligase ARI8; AltName: Full=ARIADNE-like protein ARI8; AltName: Full=Protein ariadne homolog 8 gb|AAL32886.1| Unknown protei 0.0
Blast2go: probable e3 ubiquitin-protein ligase ari7-like 0.0
unknown
biog3_v1.0_unigene1416 biogeco3 v1.0 633
AutoFact: Zinc finger protein 622 [Arabidopsis thaliana] gb|AAN12920.1| putative zinc finger protein [Arabidopsis thaliana] gb|AEE85908.1| Zinc finger protein 622 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: zinc finger protein 622 0.0
C-terminus
biog3_v1.0_unigene1544 biogeco3 v1.0 774
AutoFact: Rac-like GTP-binding protein 3 n=4 Tax=BEP clade RepID=RAC3_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: small gtpase 0.0
C-terminus
biog3_v1.0_unigene1548 biogeco3 v1.0 532
AutoFact: pfam01612, DNA_pol_A_exo1, 3'-5' exonuclease 0.0
FL-Next: tr=3'-5' exonuclease, putative; Ricinus communis (Castor bean). 0.0
Blast2go: rrp6-like protein 1 0.0
Internal
biog3_v1.0_unigene1714 biogeco3 v1.0 248
AutoFact: DNAJ heat shock N-terminal domain-containing protein n=2 Tax=Arabidopsis RepID=Q9C911_ARATH 3.0e-12
FL-Next: tr=Putative uncharacterized protein; Arabidopsis lyrata subsp. lyrata (Lyre-leaved rock-cress). 0.0
Blast2go: dnaj homolog subfamily c member 21-like 4.58468e-16
Internal
biog3_v1.0_unigene1724 biogeco3 v1.0 345
AutoFact: putative HECT ubiquitin-protein ligase 3 [Oryza sativa Japonica Group] dbj|BAD08189.1| putative HECT ubiquitin-protein ligase 3 [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: e3 ubiquitin-protein ligase upl3-like 0.0
Internal
biog3_v1.0_unigene1859 biogeco3 v1.0 277
AutoFact: Zinc finger protein, putative n=1 Tax=Ricinus communis RepID=B9SG74_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna rna-binding protein kin17 0.0
Internal
biog3_v1.0_unigene1985 biogeco3 v1.0 1198
AutoFact: B-box type zinc finger-containing protein [Arabidopsis thaliana] gb|AAS77483.1| At5g54470 [Arabidopsis thaliana] dbj|BAD94801.1| putative protein [Arabidopsis thaliana] gb|AED96499.1| B-box type zinc finger-containing protein [Arabidopsis thaliana] 2.0e-15
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Complete
biog3_v1.0_unigene1991 biogeco3 v1.0 227
AutoFact: putative HECT ubiquitin-protein ligase 3 [Oryza sativa Japonica Group] dbj|BAD08189.1| putative HECT ubiquitin-protein ligase 3 [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: e3 ubiquitin-protein ligase upl3-like 0.0
C-terminus
biog3_v1.0_unigene2048 biogeco3 v1.0 370
AutoFact: E3 ubiquitin-protein ligase UPL5 [Arabidopsis thaliana] sp|Q9SU29.1|UPL5_ARATH RecName: Full=E3 ubiquitin-protein ligase UPL5; Short=Ubiquitin-protein ligase 5 emb|CAB41727.2| polyubiquitin-like protein [Arabidopsis thaliana] emb|CAB78300.1| polyubiquitin 0.0
FL-Next: sp=E3 ubiquitin-protein ligase UPL5; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: e3 ubiquitin-protein ligase upl5 0.0
Internal

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain