Sustainpine_db
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Assembly Name: biogeco3 v1.0

Name: intracellular

Term: GO:0005622  Help

Source: GO from Blast2go

Ontology: Cellular Component

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
biog3_v1.0_unigene21898 biogeco3 v1.0 277
• AutoFact: Protein kinase APK1B, chloroplast, putative n=1 Tax=Ricinus communis RepID=B9SPN3_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
Internal
biog3_v1.0_unigene22129 biogeco3 v1.0 315
• AutoFact: putative HECT ubiquitin-protein ligase 3 [Oryza sativa Japonica Group] dbj|BAD08189.1| putative HECT ubiquitin-protein ligase 3 [Oryza sativa Japonica Group] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: e3 ubiquitin-protein ligase upl3-like 0.0
Internal
biog3_v1.0_unigene22236 biogeco3 v1.0 365
• AutoFact: WS01018.B21_E24 SS-R-N-A-11 Picea sitchensis cDNA clone WS01018_E24 3', mRNA sequence. 0.0
• Blast2go: uncharacterized protein 0.0
unknown
biog3_v1.0_unigene22261 biogeco3 v1.0 333
• AutoFact: Pattern formation protein, putative n=1 Tax=Ricinus communis RepID=B9S916_RICCO 5.99994e-41
• FL-Next: sp=Pattern formation protein EMB30; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: pattern formation protein emb30-like 1.26117e-44
Putative C-terminus
biog3_v1.0_unigene22588 biogeco3 v1.0 232
• AutoFact: pfam01612, DNA_pol_A_exo1, 3'-5' exonuclease 1.0e-17
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: werner syndrome-like exonuclease-like 0.0
Internal
biog3_v1.0_unigene22810 biogeco3 v1.0 348
• AutoFact: Unassigned protein
• Blast2go: methyl binding domain protein 2.07723e-35
Coding
biog3_v1.0_unigene22894 biogeco3 v1.0 230
• AutoFact: U4/U6.U5 tri-snRNP component [Arabidopsis thaliana] gb|AAK62582.1| AT3g05760/F10A16_5 [Arabidopsis thaliana] gb|AAK96449.1| AT3g05760/F10A16_5 [Arabidopsis thaliana] gb|AEE74293.1| U4/U6.U5 tri-snRNP component [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Glycine max (Soybean) (Glycine hispida). 0.0
• Blast2go: u4 tri-snrnp component 0.0
N-terminus
biog3_v1.0_unigene23141 biogeco3 v1.0 267
• AutoFact: 60S ribosomal protein L23A n=1 Tax=Fritillaria agrestis RepID=RL23A_FRIAG 0.0
• Blast2go: 60s ribosomal protein l23a 0.0
unknown
biog3_v1.0_unigene23273 biogeco3 v1.0 321
• AutoFact: Protein transporter, putative n=1 Tax=Ricinus communis RepID=B9T6F7_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
Internal
biog3_v1.0_unigene23448 biogeco3 v1.0 361
• AutoFact: exonuclease family protein [Arabidopsis thaliana] dbj|BAB11450.1| exonuclease-like protein [Arabidopsis thaliana] gb|AED91196.1| exonuclease family protein [Arabidopsis thaliana] 0.0
• Blast2go: exonuclease family protein 0.0
unknown
biog3_v1.0_unigene23679 biogeco3 v1.0 143
• AutoFact: Zinc finger protein, putative n=1 Tax=Ricinus communis RepID=B9SG74_RICCO 0.0
• Blast2go: dna rna-binding protein kin17 0.0
unknown
biog3_v1.0_unigene23707 biogeco3 v1.0 222
• AutoFact: ARID/BRIGHT DNA-binding domain-containing protein (Fragment) n=1 Tax=Physcomitrella patens subsp. patens RepID=A9S710_PHYPA 0.0
• Blast2go: arid bright dna-binding domain-containing protein 0.0
unknown
biog3_v1.0_unigene23793 biogeco3 v1.0 204
• AutoFact: Os01g0739000 protein n=3 Tax=Oryza sativa RepID=Q5JNL6_ORYSJ 9.0e-09
• Blast2go: mitochondrial-processing peptidase subunit alpha-like 0.0
Coding
biog3_v1.0_unigene24577 biogeco3 v1.0 234
• AutoFact: pfam00648, Peptidase_C2, Calpain family cysteine protease 9.99967e-42
• Blast2go: calpain-type cysteine protease 0.0
unknown
biog3_v1.0_unigene24645 biogeco3 v1.0 286
• AutoFact: fiber protein Fb2 [Gossypium barbadense] 6.0e-32
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
N-terminus
biog3_v1.0_unigene24856 biogeco3 v1.0 624
• AutoFact: RabGAP/TBC domain-containing protein [Arabidopsis thaliana] gb|AAK43888.1|AF370511_1 Unknown protein [Arabidopsis thaliana] gb|AAC02742.2| expressed protein [Arabidopsis thaliana] gb|AAM91215.1| unknown protein [Arabidopsis thaliana] gb|AEC08431.1| RabGAP 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: tbc1 domain family member 22a 0.0
C-terminus
biog3_v1.0_unigene24906 biogeco3 v1.0 151
• AutoFact: HAT family dimerisation domain containing protein n=2 Tax=Oryza sativa RepID=Q2R1C3_ORYSJ 0.0
• Blast2go: hat dimerisation domain-containing 0.0
unknown
biog3_v1.0_unigene25031 biogeco3 v1.0 305
• AutoFact: large subunit ribosomal protein L6 [Arabidopsis thaliana] gb|AAK73258.1| putative ribosomal protein L6 [Arabidopsis thaliana] gb|AAD15497.2| putative ribosomal protein L6 [Arabidopsis thaliana] gb|AAM66004.1| putative ribosomal protein L6 [Arabidopsis tha 6.0e-36
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: ribosomal protein l6 0.0
C-terminus
biog3_v1.0_unigene25219 biogeco3 v1.0 298
• AutoFact: Gtpase activating protein, putative n=1 Tax=Ricinus communis RepID=B9SCV2_RICCO 0.0
• Blast2go: gtpase activating 0.0
unknown
biog3_v1.0_unigene25460 biogeco3 v1.0 330
• AutoFact: relative of early flowering 6 protein [Arabidopsis thaliana] emb|CAB41155.1| putative zinc finger protein [Arabidopsis thaliana] gb|AAT77779.1| relative of early flowering 6 [Arabidopsis thaliana] gb|AEE78416.1| relative of early flowering 6 protein [Arab 1.0e-12
• FL-Next: sp=Lysine-specific demethylase REF6; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: lysine-specific demethylase ref6-like 1.55374e-16
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain