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Assembly Name: biogeco3 v1.0

Name: intracellular

Term: GO:0005622  Help

Source: GO from Blast2go

Ontology: Cellular Component


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog3_v1.0_unigene16336 biogeco3 v1.0 237
AutoFact: putative GTPase activator protein [Arabidopsis thaliana] 0.0
Blast2go: protein 0.0
unknown
biog3_v1.0_unigene17117 biogeco3 v1.0 76
AutoFact: ADP-ribosylation factor-like 2 [Arabidopsis thaliana] sp|Q9ZPX1.1|ARF5_ARATH RecName: Full=Probable ADP-ribosylation factor At2g18390 gb|AAM22961.1|AF486852_1 ARL2 G-protein [Arabidopsis thaliana] gb|AAD15498.1| putative ADP-ribosylation factor [Arabidops 0.0
Blast2go: adp-ribosylation factor 0.0
unknown
biog3_v1.0_unigene17198 biogeco3 v1.0 222
AutoFact: GTP-binding protein-relatedlike protein n=2 Tax=Arabidopsis RepID=Q9SVA6_ARATH 0.0
Blast2go: developmentally-regulated gtp-binding protein 1 0.0
Putative coding
biog3_v1.0_unigene17259 biogeco3 v1.0 293
AutoFact: Protein transporter, putative n=1 Tax=Ricinus communis RepID=B9S2Q1_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
N-terminus
biog3_v1.0_unigene17263 biogeco3 v1.0 193
AutoFact: inactive ubiquitin carboxyl-terminal hydrolase 53 [Mus musculus] sp|P15975.2|UBP53_MOUSE RecName: Full=Inactive ubiquitin carboxyl-terminal hydrolase 53; AltName: Full=Inactive ubiquitin-specific peptidase 53; AltName: Full=Per-hexamer repeat protein 3 db 5.0e-30
Blast2go: ubiquitin carboxyl-terminal hydrolase-related protein 0.0
unknown
biog3_v1.0_unigene17522 biogeco3 v1.0 326
AutoFact: ubiquitin carboxyl-terminal hydrolase-like protein [Arabidopsis thaliana] gb|AAN31917.1| unknown protein [Arabidopsis thaliana] dbj|BAE98689.1| hypothetical protein [Arabidopsis thaliana] gb|AEE84587.1| ubiquitin carboxyl-terminal hydrolase-like protein [ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Internal
biog3_v1.0_unigene17597 biogeco3 v1.0 254
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: unknown [Picea sitchensis] 1.54143e-44
C-terminus
biog3_v1.0_unigene17623 biogeco3 v1.0 392
AutoFact: probable ATP-dependent RNA helicase DDX59 [Danio rerio] gb|AAI34851.1| LOC562123 protein [Danio rerio] 7.0e-13
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: dead-box atp-dependent rna helicase 0.0
Internal
biog3_v1.0_unigene17684 biogeco3 v1.0 263
AutoFact: zinc finger protein 311 [Homo sapiens] 7.0e-30
Blast2go: zinc finger protein 311 0.0
unknown
biog3_v1.0_unigene17693 biogeco3 v1.0 202
AutoFact: putative E3 ubiquitin-protein ligase ARI8 [Arabidopsis thaliana] sp|Q8W468.1|ARI8_ARATH RecName: Full=Probable E3 ubiquitin-protein ligase ARI8; AltName: Full=ARIADNE-like protein ARI8; AltName: Full=Protein ariadne homolog 8 gb|AAL32886.1| Unknown protei 0.0
FL-Next: sp=Probable E3 ubiquitin-protein ligase ARI8; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein 0.0
Internal
biog3_v1.0_unigene17765 biogeco3 v1.0 248
AutoFact: Ribosomal protein L17 family protein [Arabidopsis thaliana] gb|AAM64301.1| ribsomal protein-like [Arabidopsis thaliana] gb|AAO24540.1| At5g09770 [Arabidopsis thaliana] dbj|BAF00072.1| ribsomal protein - like [Arabidopsis thaliana] gb|AED91444.1| Ribosomal 0.0
Blast2go: ribosomal protein l17 family protein 0.0
unknown
biog3_v1.0_unigene18094 biogeco3 v1.0 362
AutoFact: CCT domain containing protein 4.0e-17
Blast2go: zinc finger protein at1g68190-like 0.0
unknown
biog3_v1.0_unigene18359 biogeco3 v1.0 223
AutoFact: Protein kinase APK1B, chloroplast, putative n=1 Tax=Ricinus communis RepID=B9SPN3_RICCO 0.0
Blast2go: protein 0.0
unknown
biog3_v1.0_unigene19036 biogeco3 v1.0 185
AutoFact: CCT domain containing protein 8.0e-18
Blast2go: zinc finger protein constans-like 9-like 1.4013e-44
unknown
biog3_v1.0_unigene20855 biogeco3 v1.0 328
AutoFact: CONSTANS-like protein n=14 Tax=Picea RepID=A6YS25_PICAB 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: constans-like protein 0.0
Internal
biog3_v1.0_unigene20997 biogeco3 v1.0 307
AutoFact: probable ATP-dependent RNA helicase DDX59 [Danio rerio] gb|AAI34851.1| LOC562123 protein [Danio rerio] 7.0e-13
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: dead-box atp-dependent rna helicase 0.0
Internal
biog3_v1.0_unigene21088 biogeco3 v1.0 293
AutoFact: zinc finger protein 311 [Homo sapiens] 7.0e-30
FL-Next: tr=Putative uncharacterized protein; Selaginella moellendorffii (Spikemoss). 0.0
Blast2go: zinc finger protein 311 0.0
N-terminus
biog3_v1.0_unigene21110 biogeco3 v1.0 204
AutoFact: Protein kinase APK1B, chloroplast, putative n=1 Tax=Ricinus communis RepID=B9SPN3_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Internal
biog3_v1.0_unigene21718 biogeco3 v1.0 399
AutoFact: Unassigned protein
FL-Next: Isoform 2 of Methyl-CpG-binding domain-containing protein 8 OS=Arabidopsis thaliana GN=MBD8 0.0
Blast2go: methyl binding domain protein 2.07723e-35
Internal
biog3_v1.0_unigene21885 biogeco3 v1.0 276
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: zinc finger partial 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain