Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: biogeco3 v1.0

Name: intracellular

Term: GO:0005622  Help

Source: GO from Blast2go

Ontology: Cellular Component


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog3_v1.0_unigene11876 biogeco3 v1.0 621
AutoFact: PREDICTED: similar to TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor isoform 6 [Canis familiaris] 1.0e-07
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 4.582e-37
Internal
biog3_v1.0_unigene12068 biogeco3 v1.0 1406
AutoFact: ADP-ribosylation factor [Medicago sativa] emb|CAI29265.1| ADP-ribosylation factor 1 [Medicago truncatula] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: adp-ribosylation factor 0.0
Complete
biog3_v1.0_unigene13138 biogeco3 v1.0 1247
AutoFact: ADP-ribosylation factor [Medicago sativa] emb|CAI29265.1| ADP-ribosylation factor 1 [Medicago truncatula] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: adp-ribosylation factor 0.0
Complete
biog3_v1.0_unigene13294 biogeco3 v1.0 346
AutoFact: Zinc finger protein, putative n=1 Tax=Ricinus communis RepID=B9SG74_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: dna rna-binding protein kin17 0.0
Putative C-terminus
biog3_v1.0_unigene13714 biogeco3 v1.0 284
AutoFact: Zinc finger protein 622 [Arabidopsis thaliana] gb|AAN12920.1| putative zinc finger protein [Arabidopsis thaliana] gb|AEE85908.1| Zinc finger protein 622 [Arabidopsis thaliana] 0.0
Blast2go: zinc finger protein 622 0.0
unknown
biog3_v1.0_unigene13810 biogeco3 v1.0 368
AutoFact: PREDICTED: similar to TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor isoform 6 [Canis familiaris] 1.0e-05
Blast2go: unknown [Picea sitchensis] 0.0
unknown
biog3_v1.0_unigene13827 biogeco3 v1.0 395
AutoFact: VHS and GAT domain protein [Glycine max] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: vhs and gat domain protein 0.0
Internal
biog3_v1.0_unigene13885 biogeco3 v1.0 492
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein transparent testa 1-like 0.0
C-terminus
biog3_v1.0_unigene13904 biogeco3 v1.0 444
AutoFact: Os01g0739000 protein n=3 Tax=Oryza sativa RepID=Q5JNL6_ORYSJ 1.0e-08
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: mitochondrial-processing peptidase subunit alpha-like 0.0
Internal
biog3_v1.0_unigene14044 biogeco3 v1.0 278
AutoFact: pfam01612, DNA_pol_A_exo1, 3'-5' exonuclease 0.0
Blast2go: rrp6-like protein 1 0.0
Putative coding
biog3_v1.0_unigene14045 biogeco3 v1.0 593
AutoFact: high mobility group-box and ARID domain-binding domain-containing protein [Arabidopsis thaliana] sp|Q9MAT6.1|HMG15_ARATH RecName: Full=High mobility group B protein 15; AltName: Full=Nucleosome/chromatin assembly factor group D 15 gb|AAF40449.1|AC004809_7 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: high mobility group family 0.0
Internal
biog3_v1.0_unigene14095 biogeco3 v1.0 274
AutoFact: U4/U6.U5 tri-snRNP component [Arabidopsis thaliana] gb|AAK62582.1| AT3g05760/F10A16_5 [Arabidopsis thaliana] gb|AAK96449.1| AT3g05760/F10A16_5 [Arabidopsis thaliana] gb|AEE74293.1| U4/U6.U5 tri-snRNP component [Arabidopsis thaliana] 0.0
FL-Next: tr=Zinc finger protein, putative; Ricinus communis (Castor bean). 0.0
Blast2go: u4 tri-snrnp component 0.0
Internal
biog3_v1.0_unigene14225 biogeco3 v1.0 546
AutoFact: CCT domain containing protein 4.0e-17
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: zinc finger protein at1g68190-like 0.0
Internal
biog3_v1.0_unigene14336 biogeco3 v1.0 293
AutoFact: VHS and GAT domain protein [Glycine max] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: vhs and gat domain protein 0.0
Internal
biog3_v1.0_unigene14385 biogeco3 v1.0 186
AutoFact: PREDICTED: similar to TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor isoform 6 [Canis familiaris] 1.0e-07
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 4.582e-37
Putative C-terminus
biog3_v1.0_unigene14620 biogeco3 v1.0 131
AutoFact: high mobility group-box and ARID domain-binding domain-containing protein [Arabidopsis thaliana] sp|Q9MAT6.1|HMG15_ARATH RecName: Full=High mobility group B protein 15; AltName: Full=Nucleosome/chromatin assembly factor group D 15 gb|AAF40449.1|AC004809_7 0.0
Blast2go: high mobility group family 0.0
unknown
biog3_v1.0_unigene15047 biogeco3 v1.0 400
AutoFact: CONSTANS-like protein n=14 Tax=Picea RepID=A6YS25_PICAB 0.0
FL-Next: tr=Constans-like protein; Picea abies (Norway spruce) (Picea excelsa). 0.0
Blast2go: constans-like protein 0.0
Internal
biog3_v1.0_unigene15148 biogeco3 v1.0 331
AutoFact: PREDICTED: similar to KAK (KAKTUS) isoform 1 n=2 Tax=Vitis vinifera RepID=UPI0001982DD6 0.0
FL-Next: sp=E3 ubiquitin-protein ligase UPL3; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: e3 ubiquitin-protein ligase upl3-like 0.0
Internal
biog3_v1.0_unigene15287 biogeco3 v1.0 164
AutoFact: C2H2-like zinc finger protein [Arabidopsis thaliana] gb|AAL36315.1| unknown protein [Arabidopsis thaliana] gb|AAM61245.1| zinc finger-like protein [Arabidopsis thaliana] gb|AAM91787.1| unknown protein [Arabidopsis thaliana] gb|AED97727.1| C2H2-like zinc f 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: zinc finger family expressed 0.0
Internal
biog3_v1.0_unigene15455 biogeco3 v1.0 269
AutoFact: putative E3 ubiquitin-protein ligase ARI8 [Arabidopsis thaliana] sp|Q8W468.1|ARI8_ARATH RecName: Full=Probable E3 ubiquitin-protein ligase ARI8; AltName: Full=ARIADNE-like protein ARI8; AltName: Full=Protein ariadne homolog 8 gb|AAL32886.1| Unknown protei 0.0
Blast2go: probable e3 ubiquitin-protein ligase ari7-like 0.0
unknown

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain