Sustainpine_db
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Assembly Name: biogeco3 v1.0

Name: negative regulation of transcription, DNA-dependent

Term: GO:0045892  Help

Source: GO from Blast2go

Ontology: Biological Process

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
biog3_v1.0_unigene15706 biogeco3 v1.0 259
• AutoFact: Transcriptional corepressor LEUNIG n=1 Tax=Arabidopsis thaliana RepID=F4JUD2_ARATH 0.0
• FL-Next: sp=Transcriptional corepressor LEUNIG; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: transcriptional corepressor leunig 0.0
Internal
biog3_v1.0_unigene16391 biogeco3 v1.0 186
• AutoFact: Cycloartenol synthase n=2 Tax=Pinaceae RepID=Q9FQM1_ABIMA 0.0
• FL-Next: tr=Cycloartenol synthase; Abies magnifica (Red fir). 0.0
• Blast2go: cycloartenol synthase 0.0
Putative N-terminus
biog3_v1.0_unigene17408 biogeco3 v1.0 230
• AutoFact: HOS1 n=1 Tax=Citrus trifoliata RepID=D6BP27_PONTR 0.0
• FL-Next: sp=E3 ubiquitin-protein ligase HOS1; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: e3 ubiquitin-protein ligase hos1-like 0.0
Internal
biog3_v1.0_unigene17666 biogeco3 v1.0 261
• AutoFact: Histone deacetylase (Fragment) n=2 Tax=Malpighiales RepID=B9IEX4_POPTR 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: histone deacetylase 0.0
Internal
biog3_v1.0_unigene18237 biogeco3 v1.0 283
• AutoFact: GC-rich sequence DNA-binding factor [Arabidopsis thaliana] dbj|BAB10004.1| unnamed protein product [Arabidopsis thaliana] dbj|BAF36503.1| transcriptional repressor ILP1 [Arabidopsis thaliana] gb|AED91319.1| GC-rich sequence DNA-binding factor [Arabidopsis 0.0
• FL-Next: tr=Gc-rich sequence DNA-binding factor, putative; Ricinus communis (Castor bean). 0.0
• Blast2go: gc-rich sequence dna-binding factor 1-like 0.0
Internal
biog3_v1.0_unigene18735 biogeco3 v1.0 165
• AutoFact: Unassigned protein
• FL-Next: sp=RNA polymerase II C-terminal domain phosphatase-like 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: rna polymerase ii c-terminal domain phosphatase-like 1-like 0.0
Putative N-terminus
biog3_v1.0_unigene18945 biogeco3 v1.0 284
• AutoFact: DNA-binding factor, putative [Arabidopsis thaliana] gb|AAP68263.1| At1g33240 [Arabidopsis thaliana] 1.0e-11
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: gt-2 factor 0.0
C-terminus
biog3_v1.0_unigene19665 biogeco3 v1.0 188
• AutoFact: DNA repair protein xp-E, putative n=1 Tax=Ricinus communis RepID=B9SKT9_RICCO 0.0
• Blast2go: dna damage-binding protein 1a 0.0
unknown
biog3_v1.0_unigene21526 biogeco3 v1.0 325
• AutoFact: auxin response factor 2 [Solanum lycopersicum] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: auxin response factor-like protein 0.0
Internal
biog3_v1.0_unigene21654 biogeco3 v1.0 354
• AutoFact: STYLOSA protein n=1 Tax=Antirrhinum majus RepID=Q6H976_ANTMA 0.0
• FL-Next: sp=Transcriptional corepressor LEUNIG; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: transcriptional corepressor leunig 0.0
Internal
biog3_v1.0_unigene22242 biogeco3 v1.0 138
• AutoFact: Histone deacetylase (Fragment) n=2 Tax=Vitis vinifera RepID=D7TSU0_VITVI 0.0
• Blast2go: histone deacetylase 0.0
unknown
biog3_v1.0_unigene22638 biogeco3 v1.0 400
• AutoFact: DNA damage-binding protein 1a n=5 Tax=Brassicaceae RepID=DDB1A_ARATH 0.0
• FL-Next: sp=DNA damage-binding protein 1a; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: uv damaged dna binding protein 1 0.0
Internal
biog3_v1.0_unigene23262 biogeco3 v1.0 262
• AutoFact: Putative auxin response factor 2/1/9 (Fragment) n=1 Tax=Cycas rumphii RepID=E1UHY0_CYCRU 0.0
• FL-Next: tr=Putative auxin response factor 3/4; Pinus pinaster (Maritime pine). 0.0
• Blast2go: auxin response factor 2 0.0
Internal
biog3_v1.0_unigene23543 biogeco3 v1.0 206
• AutoFact: E3 ubiquitin-protein ligase HOS1 [Arabidopsis thaliana] sp|Q84JU6.1|HOS1_ARATH RecName: Full=E3 ubiquitin-protein ligase HOS1; AltName: Full=Protein HIGH EXPRESSION OF OSMOTICALLY RESPONSIVE GENE 1; AltName: Full=RING finger protein HOS1 gb|AAO42259.1| un 6.0e-38
• Blast2go: e3 ubiquitin-protein ligase hos1-like 0.0
unknown
biog3_v1.0_unigene23802 biogeco3 v1.0 218
• AutoFact: Tetratricopeptide repeat protein, tpr, putative n=1 Tax=Ricinus communis RepID=B9SG46_RICCO 0.0
• FL-Next: tr=Os07g0113700 protein; Oryza sativa subsp. japonica (Rice). 0.0
• Blast2go: tetratricopeptide repeat protein 0.0
Internal
biog3_v1.0_unigene23975 biogeco3 v1.0 300
• AutoFact: DNA repair protein xp-E, putative n=1 Tax=Ricinus communis RepID=B9SKT9_RICCO 0.0
• FL-Next: sp=DNA damage-binding protein 1; Solanum lycopersicum (Tomato) (Lycopersicon esculentum). 0.0
• Blast2go: dna damage-binding protein 1a 0.0
Internal
biog3_v1.0_unigene24141 biogeco3 v1.0 368
• AutoFact: pfam00400, WD40, WD domain, G-beta repeat 3.0e-07
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: transcriptional corepressor leunig 0.0
Putative Complete
biog3_v1.0_unigene24310 biogeco3 v1.0 289
• AutoFact: Flavoprotein wrbA, putative n=1 Tax=Ricinus communis RepID=B9SI05_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: quinone reductase family protein 0.0
C-terminus
biog3_v1.0_unigene24739 biogeco3 v1.0 676
• AutoFact: auxin response factor 2 [Arabidopsis thaliana] ref|NP_201006.2| auxin response factor 2 [Arabidopsis thaliana] ref|NP_974980.1| auxin response factor 2 [Arabidopsis thaliana] sp|Q94JM3.2|ARFB_ARATH RecName: Full=Auxin response factor 2; AltName: Full=ARF1 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: auxin response factor 2 0.0
Putative Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain