Sustainpine_db
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Assembly Name: biogeco3 v1.0

Name: negative regulation of transcription, DNA-dependent

Term: GO:0045892  Help

Source: GO from Blast2go

Ontology: Biological Process

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
biog3_v1.0_unigene7793 biogeco3 v1.0 257
• AutoFact: Histone deacetylase (Fragment) n=2 Tax=Vitis vinifera RepID=D7TSU0_VITVI 0.0
• FL-Next: sp=Histone deacetylase 19; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: histone deacetylase 0.0
Internal
biog3_v1.0_unigene8143 biogeco3 v1.0 282
• AutoFact: pfam00400, WD40, WD domain, G-beta repeat 3.0e-07
• FL-Next: sp=Transcriptional corepressor LEUNIG; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: transcriptional corepressor leunig 0.0
Internal
biog3_v1.0_unigene8294 biogeco3 v1.0 1180
• AutoFact: DNA repair protein xp-E, putative n=1 Tax=Ricinus communis RepID=B9SKT9_RICCO 0.0
• FL-Next: sp=DNA damage-binding protein 1; cheesmanii). 0.0
• Blast2go: dna damage-binding protein 1a 0.0
Internal
biog3_v1.0_unigene8325 biogeco3 v1.0 314
• AutoFact: auxin response factor 2 [Solanum lycopersicum] 0.0
• FL-Next: tr=Putative auxin response factor 3/4; Pinus pinaster (Maritime pine). 0.0
• Blast2go: auxin response factor-like protein 0.0
Internal
biog3_v1.0_unigene9045 biogeco3 v1.0 271
• AutoFact: Tetratricopeptide repeat protein, tpr, putative n=1 Tax=Ricinus communis RepID=B9SG46_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Blast2go: tetratricopeptide repeat protein 0.0
Internal
biog3_v1.0_unigene9506 biogeco3 v1.0 1684
• AutoFact: calcium-dependent lipid-binding domain-containing protein [Arabidopsis thaliana] ref|NP_001030908.1| calcium-dependent lipid-binding domain-containing protein [Arabidopsis thaliana] emb|CAB94141.1| CaLB protein [Arabidopsis thaliana] gb|AAO42810.1| At3g61 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: integral membrane single c2 domain protein 0.0
Putative Complete
biog3_v1.0_unigene9619 biogeco3 v1.0 484
• AutoFact: auxin response factor 2 [Arabidopsis thaliana] ref|NP_201006.2| auxin response factor 2 [Arabidopsis thaliana] ref|NP_974980.1| auxin response factor 2 [Arabidopsis thaliana] sp|Q94JM3.2|ARFB_ARATH RecName: Full=Auxin response factor 2; AltName: Full=ARF1 0.0
• FL-Next: tr=Putative auxin response factor 3/4; Pinus pinaster (Maritime pine). 0.0
• Blast2go: auxin response factor 2 0.0
Internal
biog3_v1.0_unigene10064 biogeco3 v1.0 1071
• AutoFact: minor allergen [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: minor allergen 0.0
N-terminus
biog3_v1.0_unigene10863 biogeco3 v1.0 861
• AutoFact: Tetratricopeptide repeat protein, tpr, putative n=1 Tax=Ricinus communis RepID=B9SG46_RICCO 0.0
• FL-Next: tr=Tetratricopeptide repeat protein, tpr, putative; Ricinus communis (Castor bean). 0.0
• Blast2go: tetratricopeptide repeat protein 0.0
Internal
biog3_v1.0_unigene11082 biogeco3 v1.0 610
• AutoFact: Histone deacetylase (Fragment) n=2 Tax=Vitis vinifera RepID=D7TSU0_VITVI 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: histone deacetylase 0.0
Internal
biog3_v1.0_unigene11105 biogeco3 v1.0 1719
• AutoFact: Putative auxin response factor 2/1/9 (Fragment) n=1 Tax=Cycas rumphii RepID=E1UHY0_CYCRU 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: auxin response factor 2 0.0
C-terminus
biog3_v1.0_unigene11106 biogeco3 v1.0 638
• AutoFact: Histone deacetylase (Fragment) n=2 Tax=Vitis vinifera RepID=D7TSU0_VITVI 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: histone deacetylase 0.0
N-terminus
biog3_v1.0_unigene11166 biogeco3 v1.0 619
• AutoFact: protein pleiotropic regulatory locus 1 [Arabidopsis thaliana] sp|Q42384.1|PRL1_ARATH RecName: Full=Protein pleiotropic regulatory locus 1; Short=Protein PRL1; AltName: Full=MOS4-associated complex protein 2; Short=MAC protein 2 emb|CAA58031.1| PRL1 [Arabi 0.0
• FL-Next: sp=Protein pleiotropic regulatory locus 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: protein pleiotropic regulatory locus 1-like 0.0
C-terminus
biog3_v1.0_unigene11236 biogeco3 v1.0 1695
• AutoFact: Histone deacetylase n=2 Tax=Physcomitrella patens subsp. patens RepID=A9TG19_PHYPA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: histone deacetylase 0.0
Complete
biog3_v1.0_unigene13267 biogeco3 v1.0 482
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: zinc ion binding protein 0.0
N-terminus
biog3_v1.0_unigene13891 biogeco3 v1.0 418
• AutoFact: DNA repair protein xp-E, putative n=1 Tax=Ricinus communis RepID=B9SKT9_RICCO 0.0
• FL-Next: sp=DNA damage-binding protein 1b; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: dna damage-binding protein 1a 0.0
Internal
biog3_v1.0_unigene14652 biogeco3 v1.0 499
• AutoFact: cell growth defect factor-like [Solanum tuberosum] 5.0e-24
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: uncharacterized protein 0.0
N-terminus
biog3_v1.0_unigene14858 biogeco3 v1.0 499
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: zinc ion binding protein 0.0
C-terminus
biog3_v1.0_unigene15087 biogeco3 v1.0 266
• AutoFact: DNA repair protein xp-E, putative n=1 Tax=Ricinus communis RepID=B9SKT9_RICCO 0.0
• FL-Next: sp=DNA damage-binding protein 1; Solanum lycopersicum (Tomato) (Lycopersicon esculentum). 0.0
• Blast2go: dna damage-binding protein 1a 0.0
Internal
biog3_v1.0_unigene15448 biogeco3 v1.0 289
• AutoFact: Transcriptional corepressor LEUNIG n=1 Tax=Arabidopsis thaliana RepID=F4JUD2_ARATH 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: transcriptional corepressor leunig 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain