|
Sequence
|
Assembly
|
Length (nt)
|
|
Full-Length
|
|
biog3_v1.0_unigene100
|
biogeco3 v1.0
|
256
|
|
• AutoFact: 30S ribosomal protein S6 alpha [Arabidopsis thaliana] sp|Q8VY91.1|RR6_ARATH RecName: Full=30S ribosomal protein S6 alpha, chloroplastic; Flags: Precursor gb|AAL61951.1| plastid ribosomal protein S6, putative [Arabidopsis thaliana] gb|AAM47900.1| plastid r
|
5.04467e-44
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: protein
|
0.0
|
|
Internal
|
|
biog3_v1.0_unigene414
|
biogeco3 v1.0
|
871
|
|
• AutoFact: 40S ribosomal protein S11-1 n=11 Tax=core eudicotyledons RepID=RS111_ARATH
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: 40s ribosomal protein s11
|
0.0
|
|
Complete
|
|
biog3_v1.0_unigene439
|
biogeco3 v1.0
|
319
|
|
• AutoFact: similar to 60S ribosomal protein L35 [Solanum lycopersicum]
|
8.99634e-43
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: 60s ribosomal protein l35
|
0.0
|
|
N-terminus
|
|
biog3_v1.0_unigene609
|
biogeco3 v1.0
|
578
|
|
• AutoFact: Ribosomal protein L10 [Medicago truncatula]
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: protein
|
0.0
|
|
N-terminus
|
|
biog3_v1.0_unigene1123
|
biogeco3 v1.0
|
353
|
|
• AutoFact: RecName: Full=Putative transcription elongation factor SPT5 homolog 1 emb|CAB52557.1| putative protein [Arabidopsis thaliana] emb|CAB77960.1| putative protein [Arabidopsis thaliana]
|
0.0
|
|
• FL-Next: sp=Putative transcription elongation factor SPT5 homolog 1; Arabidopsis thaliana (Mouse-ear cress).
|
0.0
|
|
• Blast2go: global transcription factor group
|
0.0
|
|
Internal
|
|
biog3_v1.0_unigene1566
|
biogeco3 v1.0
|
497
|
|
• AutoFact: putative ribosomal protein S5 [Oryza sativa Japonica Group] dbj|BAD08197.1| putative ribosomal protein S5 [Oryza sativa Japonica Group] dbj|BAH00782.1| unnamed protein product [Oryza sativa Japonica Group]
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: ribosomal protein s5 family protein
|
0.0
|
|
C-terminus
|
|
biog3_v1.0_unigene1798
|
biogeco3 v1.0
|
671
|
|
• AutoFact: 50S ribosomal protein L19-1 [Arabidopsis thaliana] sp|Q8W463.1|RK191_ARATH RecName: Full=50S ribosomal protein L19-1, chloroplastic; Flags: Precursor gb|AAL32899.1| Unknown protein [Arabidopsis thaliana] gb|AAM10187.1| unknown protein [Arabidopsis thalian
|
1.0e-36
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: 50s ribosomal protein l19
|
0.0
|
|
Putative C-terminus
|
|
biog3_v1.0_unigene1813
|
biogeco3 v1.0
|
604
|
|
• AutoFact: Whole genome shotgun sequence of line PN40024, scaffold_4.assembly12x (Fragment) n=1 Tax=Vitis vinifera RepID=D7SJX0_VITVI
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: structural constituent of
|
0.0
|
|
Putative C-terminus
|
|
biog3_v1.0_unigene1934
|
biogeco3 v1.0
|
319
|
|
• AutoFact: 30S ribosomal protein S10, putative n=1 Tax=Ricinus communis RepID=B9S9Q5_RICCO
|
5.00264e-43
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: 30s ribosomal protein s10
|
0.0
|
|
C-terminus
|
|
biog3_v1.0_unigene1954
|
biogeco3 v1.0
|
221
|
|
• AutoFact: Ribosomal protein L12/ ATP-dependent Clp protease adaptor protein [Arabidopsis thaliana] emb|CAB38305.1| ribosomal-like protein [Arabidopsis thaliana] emb|CAB80431.1| ribosomal-like protein [Arabidopsis thaliana] gb|AAL67122.1| AT4g37660/F19F18_150 [Arabi
|
7.0e-32
|
|
• Blast2go: 50s ribosomal protein l7 l12-like
|
1.4013e-45
|
|
unknown
|
|
biog3_v1.0_unigene2004
|
biogeco3 v1.0
|
625
|
|
• AutoFact: 50S ribosomal protein L18, chloroplast, putative n=1 Tax=Ricinus communis RepID=B9RCM8_RICCO
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: 50s ribosomal protein l18
|
0.0
|
|
Complete
|
|
biog3_v1.0_unigene2351
|
biogeco3 v1.0
|
1308
|
|
• AutoFact: replication factor C subunit 3 [Arabidopsis thaliana] gb|AAG51681.1|AC010704_25 putative replication factor C; 24844-22715 [Arabidopsis thaliana] gb|AAL38893.1| putative replication factor C [Arabidopsis thaliana] gb|AAM51357.1| putative replication facto
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: replication factor c subunit 5-like
|
0.0
|
|
Complete
|
|
biog3_v1.0_unigene2549
|
biogeco3 v1.0
|
216
|
|
• AutoFact: 40S ribosomal protein S6 n=7 Tax=Spermatophyta RepID=RS6_ASPOF
|
0.0
|
|
• Blast2go: protein
|
0.0
|
|
unknown
|
|
biog3_v1.0_unigene3241
|
biogeco3 v1.0
|
1299
|
|
• AutoFact: Cationic amino acid transporter n=1 Tax=Populus trichocarpa RepID=B9GP57_POPTR
|
0.0
|
|
• FL-Next: tr=Cationic amino acid transporter; subsp. trichocarpa).
|
0.0
|
|
• Blast2go: uncharacterized amino acid permease -like
|
0.0
|
|
C-terminus
|
|
biog3_v1.0_unigene3369
|
biogeco3 v1.0
|
503
|
|
• AutoFact: Cationic amino acid transporter n=1 Tax=Populus trichocarpa RepID=B9GP57_POPTR
|
0.0
|
|
• FL-Next: tr=Cationic amino acid transporter, putative; Ricinus communis (Castor bean).
|
0.0
|
|
• Blast2go: uncharacterized amino acid permease -like
|
0.0
|
|
Internal
|
|
biog3_v1.0_unigene3823
|
biogeco3 v1.0
|
358
|
|
• AutoFact: Ribosomal protein L12/ ATP-dependent Clp protease adaptor protein [Arabidopsis thaliana] emb|CAB38305.1| ribosomal-like protein [Arabidopsis thaliana] emb|CAB80431.1| ribosomal-like protein [Arabidopsis thaliana] gb|AAL67122.1| AT4g37660/F19F18_150 [Arabi
|
7.0e-32
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: 50s ribosomal protein l7 l12-like
|
1.4013e-45
|
|
C-terminus
|
|
biog3_v1.0_unigene3862
|
biogeco3 v1.0
|
415
|
|
• AutoFact: putative ribosomal protein S5 [Oryza sativa Japonica Group] dbj|BAD08197.1| putative ribosomal protein S5 [Oryza sativa Japonica Group] dbj|BAH00782.1| unnamed protein product [Oryza sativa Japonica Group]
|
0.0
|
|
• Blast2go: ribosomal protein s5 family protein
|
0.0
|
|
unknown
|
|
biog3_v1.0_unigene4032
|
biogeco3 v1.0
|
337
|
|
• AutoFact: similar to 60S ribosomal protein L35 [Solanum lycopersicum]
|
8.99634e-43
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: 60s ribosomal protein l35
|
0.0
|
|
Internal
|
|
biog3_v1.0_unigene4064
|
biogeco3 v1.0
|
417
|
|
• AutoFact: Ribosomal protein L10 [Medicago truncatula]
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: protein
|
0.0
|
|
C-terminus
|
|
biog3_v1.0_unigene4294
|
biogeco3 v1.0
|
588
|
|
• AutoFact: 50S ribosomal protein L15, putative n=1 Tax=Ricinus communis RepID=B9T052_RICCO
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: plastid ribosomal protein cl15
|
0.0
|
|
Putative C-terminus
|
