Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: biogeco3 v1.0

Name: ribosome

Term: GO:0005840  Help

Source: GO from Blast2go

Ontology: Cellular Component


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog3_v1.0_unigene6979 biogeco3 v1.0 357
AutoFact: Ribosomal protein L7Ae-like [Arabidopsis thaliana] 1.0e-31
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
C-terminus
biog3_v1.0_unigene7685 biogeco3 v1.0 382
AutoFact: protein kinase family protein [Arabidopsis thaliana] gb|AAK43919.1|AF370600_1 putative protein kinase [Arabidopsis thaliana] gb|AAB80675.1| putative protein kinase [Arabidopsis thaliana] gb|ACI49790.1| At2g33580 [Arabidopsis thaliana] gb|AEC08855.1| prote 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Internal
biog3_v1.0_unigene8481 biogeco3 v1.0 653
AutoFact: pfam04389, Peptidase_M28, Peptidase family M28 4.99983e-42
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: zn-dependent exopeptidase-like protein 0.0
Internal
biog3_v1.0_unigene8894 biogeco3 v1.0 481
AutoFact: pfam04389, Peptidase_M28, Peptidase family M28 4.99983e-42
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: zn-dependent exopeptidase-like protein 0.0
Internal
biog3_v1.0_unigene9439 biogeco3 v1.0 582
AutoFact: Glycylpeptide N-tetradecanoyltransferase n=1 Tax=Ricinus communis RepID=B9RK90_RICCO 0.0
FL-Next: sp=Glycylpeptide N-tetradecanoyltransferase 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: glycylpeptide n-tetradecanoyltransferase 1 0.0
Internal
biog3_v1.0_unigene9587 biogeco3 v1.0 543
AutoFact: RecName: Full=Putative transcription elongation factor SPT5 homolog 1 emb|CAB52557.1| putative protein [Arabidopsis thaliana] emb|CAB77960.1| putative protein [Arabidopsis thaliana] 0.0
FL-Next: sp=Putative transcription elongation factor SPT5 homolog 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: global transcription factor group 0.0
Internal
biog3_v1.0_unigene9876 biogeco3 v1.0 1497
AutoFact: Glycylpeptide N-tetradecanoyltransferase n=1 Tax=Ricinus communis RepID=B9RK90_RICCO 0.0
FL-Next: sp=Glycylpeptide N-tetradecanoyltransferase 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: glycylpeptide n-tetradecanoyltransferase 1 0.0
C-terminus
biog3_v1.0_unigene10348 biogeco3 v1.0 1155
AutoFact: pfam01370, Epimerase, NAD dependent epimerase/dehydratase family 4.0e-20
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rna binding protein 0.0
N-terminus
biog3_v1.0_unigene10961 biogeco3 v1.0 617
AutoFact: RecName: Full=Putative transcription elongation factor SPT5 homolog 1 emb|CAB52557.1| putative protein [Arabidopsis thaliana] emb|CAB77960.1| putative protein [Arabidopsis thaliana] 0.0
FL-Next: sp=Putative transcription elongation factor SPT5 homolog 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: global transcription factor group 0.0
Internal
biog3_v1.0_unigene11231 biogeco3 v1.0 502
AutoFact: 50S ribosomal protein L3-2 [Arabidopsis thaliana] sp|Q9LRN8.1|RK3B_ARATH RecName: Full=50S ribosomal protein L3-2, chloroplastic; Flags: Precursor dbj|BAB02923.1| 50S ribosomal protein L3 [Arabidopsis thaliana] gb|AEE75957.1| 50S ribosomal protein L3-2 [A 0.0
Blast2go: 50s ribosomal protein l3-2 0.0
unknown
biog3_v1.0_unigene11543 biogeco3 v1.0 939
AutoFact: 40S ribosomal protein S9, putative n=5 Tax=fabids RepID=B9RUP5_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 40s ribosomal protein 0.0
Complete
biog3_v1.0_unigene11783 biogeco3 v1.0 364
AutoFact: putative 30S ribosomal protein [Arabidopsis thaliana] gb|AAK43963.1|AF370148_1 unknown protein [Arabidopsis thaliana] gb|AAP04042.1| unknown protein [Arabidopsis thaliana] gb|AED93316.1| putative 30S ribosomal protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 30s ribosomal protein 0.0
Putative C-terminus
biog3_v1.0_unigene13494 biogeco3 v1.0 371
AutoFact: plastid-specific 30S ribosomal protein [Oryza sativa Indica Group] 6.0e-31
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: plastid-specific 30s ribosomal protein 3 0.0
C-terminus
biog3_v1.0_unigene13510 biogeco3 v1.0 479
AutoFact: 50S ribosomal protein L35 n=1 Tax=Picea sitchensis RepID=A9NKM1_PICSI 0.0
FL-Next: sp=50S ribosomal protein L35; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ribosomal protein l35 0.0
Putative Complete
biog3_v1.0_unigene14184 biogeco3 v1.0 254
AutoFact: MAK16 protein-like protein [Arabidopsis thaliana] gb|AEE30367.1| MAK16 protein-like protein [Arabidopsis thaliana] 0.0
Blast2go: protein 0.0
Coding
biog3_v1.0_unigene14916 biogeco3 v1.0 462
AutoFact: Ribosomal protein L9/RNase H1 [Arabidopsis thaliana] dbj|BAA97147.1| unnamed protein product [Arabidopsis thaliana] gb|AAO22701.1| unknown protein [Arabidopsis thaliana] gb|AAO42390.1| unknown protein [Arabidopsis thaliana] gb|AED96300.1| Ribosomal protei 3.0e-27
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 50s ribosomal protein l9 0.0
C-terminus
biog3_v1.0_unigene15620 biogeco3 v1.0 275
AutoFact: MAK16 protein-like protein [Arabidopsis thaliana] gb|AEE30367.1| MAK16 protein-like protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Internal
biog3_v1.0_unigene16308 biogeco3 v1.0 235
AutoFact: Ribosomal_S21 domain containing protein 9.0e-07
Blast2go: ribosomal protein s21 family protein 0.0
Putative coding
biog3_v1.0_unigene16368 biogeco3 v1.0 319
AutoFact: 50S ribosomal protein L35 n=1 Tax=Picea sitchensis RepID=D5ADT3_PICSI 0.0
FL-Next: sp=50S ribosomal protein L35; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Putative C-terminus
biog3_v1.0_unigene16780 biogeco3 v1.0 90
AutoFact: 40S ribosomal protein S25 [Glycine max] 1.0e-27
Blast2go: 40s ribosomal protein 2.52778e-36
unknown

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain