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Assembly Name: biogeco3 v1.0

Name: response to light stimulus

Term: GO:0009416  Help

Source: GO from Blast2go

Ontology: Biological Process


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog3_v1.0_unigene270 biogeco3 v1.0 898
AutoFact: 3-ketoacyl-CoA synthase n=1 Tax=Vitis vinifera RepID=A5AYN9_VITVI 0.0
FL-Next: sp=3-ketoacyl-CoA synthase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: beta-ketoacyl-coa synthase family protein 0.0
Internal
biog3_v1.0_unigene301 biogeco3 v1.0 2095
AutoFact: pfam03321, GH3, GH3 auxin-responsive promoter 0.0
FL-Next: sp=Probable indole-3-acetic acid-amido synthetase GH3.5; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: probable indole-3-acetic acid-amido synthetase -like 0.0
Complete
biog3_v1.0_unigene351 biogeco3 v1.0 294
AutoFact: Phototropic-responsive NPH3 protein [Arabidopsis thaliana] sp|Q9FKB6.1|Y5880_ARATH RecName: Full=BTB/POZ domain-containing protein At5g48800 dbj|BAB09433.1| non-phototropic hypocotyl-like protein [Arabidopsis thaliana] gb|AED95726.1| Phototropic-responsiv 0.0
FL-Next: sp=BTB/POZ domain-containing protein At5g48800; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: phototropic-responsive nph3 family protein 0.0
Internal
biog3_v1.0_unigene520 biogeco3 v1.0 809
AutoFact: 3-ketoacyl-CoA synthase n=1 Tax=Vitis vinifera RepID=A5AYN9_VITVI 0.0
FL-Next: sp=3-ketoacyl-CoA synthase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: beta-ketoacyl-coa synthase family protein 0.0
C-terminus
biog3_v1.0_unigene578 biogeco3 v1.0 1335
AutoFact: ferredoxin-dependent glutamate synthase [Glycine max] 0.0
FL-Next: Isoform 2 of Ferredoxin-dependent glutamate synthase 1, chloroplastic OS=Arabidopsis thaliana GN=GLU1 0.0
Blast2go: ferredoxin-dependent glutamate synthase 0.0
Internal
biog3_v1.0_unigene1691 biogeco3 v1.0 649
AutoFact: F-box protein ORE9 n=12 Tax=Arabidopsis RepID=ORE9_ARATH 5.0e-15
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: max2 0.0
Internal
biog3_v1.0_unigene1969 biogeco3 v1.0 403
AutoFact: Cytochrome P450, putative n=1 Tax=Ricinus communis RepID=B9SEM0_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: cytochrome p450 0.0
Internal
biog3_v1.0_unigene2586 biogeco3 v1.0 1155
AutoFact: ferredoxin-dependent glutamate synthase [Glycine max] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ferredoxin-dependent glutamate synthase 0.0
Complete
biog3_v1.0_unigene3052 biogeco3 v1.0 320
AutoFact: Acyl carrier protein n=3 Tax=Picea sitchensis RepID=A9NK69_PICSI 0.0
Blast2go: acyl carrier protein 0.0
Putative coding
biog3_v1.0_unigene3129 biogeco3 v1.0 764
AutoFact: 3-ketoacyl-CoA synthase n=1 Tax=Sorghum bicolor RepID=C5YW23_SORBI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 3-ketoacyl- synthase 0.0
Putative C-terminus
biog3_v1.0_unigene3182 biogeco3 v1.0 1976
AutoFact: Dihydrolipoyl dehydrogenase n=2 Tax=Picea sitchensis RepID=B8LLJ4_PICSI 0.0
FL-Next: sp=Dihydrolipoyl dehydrogenase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dihydrolipoamide dehydrogenase precursor 0.0
Complete
biog3_v1.0_unigene3370 biogeco3 v1.0 1772
AutoFact: Formate dehydrogenase n=1 Tax=Populus trichocarpa RepID=A9PEQ6_POPTR 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: formate dehydrogenase 0.0
Complete
biog3_v1.0_unigene3496 biogeco3 v1.0 449
AutoFact: 3-ketoacyl-CoA synthase n=2 Tax=Selaginella moellendorffii RepID=D8REC4_SELML 0.0
FL-Next: sp=3-ketoacyl-CoA synthase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 3-ketoacyl- synthase 11-like 0.0
C-terminus
biog3_v1.0_unigene4038 biogeco3 v1.0 1399
AutoFact: pfam05920, Homeobox_KN, Homeobox KN domain 2.0e-16
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: homeobox protein knotted-1-like 3 0.0
C-terminus
biog3_v1.0_unigene4052 biogeco3 v1.0 823
AutoFact: Ferredoxin-1, chloroplastic n=1 Tax=Mesembryanthemum crystallinum RepID=FER1_MESCR 2.0e-39
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ferrodoxin precursor 0.0
Complete
biog3_v1.0_unigene4223 biogeco3 v1.0 425
AutoFact: DUF221 multi-domain protein 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: uncharacterized membrane protein ylr241w-like 0.0
Internal
biog3_v1.0_unigene4522 biogeco3 v1.0 287
AutoFact: 3-ketoacyl-CoA synthase n=1 Tax=Medicago truncatula RepID=Q2HTC9_MEDTR 0.0
FL-Next: sp=3-ketoacyl-CoA synthase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: fatty acid elongase 3-ketoacyl- synthase 1 0.0
Internal
biog3_v1.0_unigene5566 biogeco3 v1.0 1916
AutoFact: Peptidase M50 family protein [Arabidopsis thaliana] gb|AAK92744.1| unknown protein [Arabidopsis thaliana] gb|AAN71977.1| unknown protein [Arabidopsis thaliana] gb|AED93947.1| Peptidase M50 family protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
C-terminus
biog3_v1.0_unigene5938 biogeco3 v1.0 877
AutoFact: 3-ketoacyl-CoA synthase n=2 Tax=Selaginella moellendorffii RepID=D8REC4_SELML 0.0
FL-Next: sp=3-ketoacyl-CoA synthase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 3-ketoacyl- synthase 11-like 0.0
Internal
biog3_v1.0_unigene6179 biogeco3 v1.0 2206
AutoFact: ferric reduction oxidase 6 [Arabidopsis thaliana] gb|AAM14089.1| putative FRO2; NADPH oxidase [Arabidopsis thaliana] gb|AAM45050.1| putative FRO2; NADPH oxidase [Arabidopsis thaliana] gb|AED95851.1| ferric reduction oxidase 6 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ferric reductase-like transmembrane component 0.0
Putative Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain