Sustainpine_db
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Assembly Name: biogeco3 v1.0

Name: intracellular part

Term: GO:0044424  Help

Source: GO from Blast2go

Ontology: Cellular Component


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog3_v1.0_unigene23397 biogeco3 v1.0 200
AutoFact: Like-Sm ribonucleoprotein-related, core [Medicago truncatula] 1.0e-32
Blast2go: small nuclear ribonucleoprotein g 0.0
unknown
biog3_v1.0_unigene23470 biogeco3 v1.0 204
AutoFact: putative small nuclear ribonucleoprotein [Arabidopsis thaliana] ref|XP_002886267.1| hypothetical protein ARALYDRAFT_900374 [Arabidopsis lyrata subsp. lyrata] gb|AAD08943.1| putative small nuclear ribonucleoprotein E [Arabidopsis thaliana] gb|AAM64436.1| p 2.0e-37
Blast2go: small nuclear ribonucleoprotein e 0.0
unknown
biog3_v1.0_unigene25316 biogeco3 v1.0 465
AutoFact: Glycine rich protein-like n=4 Tax=Arabidopsis RepID=Q8LAC6_ARATH 9.99967e-42
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: u6 snrna-associated sm-like protein lsm4 0.0
Putative Complete
biog3_v1.0_unigene25804 biogeco3 v1.0 266
AutoFact: polyubiquitin 4 [Arabidopsis thaliana] ref|XP_002881273.1| hypothetical protein ARALYDRAFT_482268 [Arabidopsis lyrata subsp. lyrata] sp|P0CH32.1|UBQ4_ARATH RecName: Full=Polyubiquitin 4; Contains: RecName: Full=Ubiquitin; Flags: Precursor emb|CAA31331.1| 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: hexaubiquitin protein 0.0
Putative N-terminus
biog3_v1.0_unigene26313 biogeco3 v1.0 194
AutoFact: Tubulin beta-4 chain n=11 Tax=Eukaryota RepID=TBB4_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: tubulin beta-4 chain 0.0
Internal
biog3_v1.0_unigene26457 biogeco3 v1.0 1020
AutoFact: Polyubiquitin-C n=2 Tax=Sus scrofa RepID=UBC_PIG 0.0
FL-Next: tr=Putative polyubiquitin; Picea abies (Norway spruce) (Picea excelsa). 0.0
Blast2go: polyubiquitin 10 0.0
Complete
biog3_v1.0_unigene26580 biogeco3 v1.0 340
AutoFact: Calcium binding protein n=1 Tax=Pinus taeda RepID=O22429_PINTA 0.0
FL-Next: tr=Calcium binding protein; Pinus taeda (Loblolly pine). 0.0
Blast2go: calcium-binding pollen allergen 0.0
Putative Complete
biog3_v1.0_unigene26659 biogeco3 v1.0 306
AutoFact: Tubulin beta-4 chain n=11 Tax=Eukaryota RepID=TBB4_ORYSJ 0.0
Blast2go: beta-tubulin 2 0.0
unknown
biog3_v1.0_unigene26709 biogeco3 v1.0 219
AutoFact: polyubiquitin containing 7 ubiquitin monomers [Zea mays] 0.0
FL-Next: tr=Putative polyubiquitin; Picea abies (Norway spruce) (Picea excelsa). 0.0
Blast2go: ubiquitin 0.0
N-terminus
biog3_v1.0_unigene26711 biogeco3 v1.0 372
AutoFact: [O] COG5272 Ubiquitin 0.0
FL-Next: tr=Polyubiquitin; Pinus sylvestris (Scots pine). 0.0
Blast2go: ubiquitin 0.0
Putative Complete
biog3_v1.0_unigene26712 biogeco3 v1.0 340
AutoFact: [O] COG5272 Ubiquitin 0.0
FL-Next: tr=Putative polyubiquitin; Picea abies (Norway spruce) (Picea excelsa). 0.0
Blast2go: ubiquitin 0.0
Putative Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain