|
Sequence
|
Assembly
|
Length (nt)
|
|
Full-Length
|
|
biog3_v1.0_unigene348
|
biogeco3 v1.0
|
330
|
|
• AutoFact: Transcription factor IIA, alpha/beta subunit [Arabidopsis thaliana] ref|NP_172228.3| Transcription factor IIA, alpha/beta subunit [Arabidopsis thaliana] emb|CAA11525.1| transcription factor IIA large subunit [Arabidopsis thaliana] gb|AAR28029.1| TFIIA-L1
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: transcription factor transcription initiation factor
|
0.0
|
|
Internal
|
|
biog3_v1.0_unigene729
|
biogeco3 v1.0
|
603
|
|
• AutoFact: Poly [ADP-ribose] polymerase 1 [Arabidopsis thaliana] sp|Q9ZP54.2|PARP1_ARATH RecName: Full=Poly [ADP-ribose] polymerase 1; Short=PARP-1; AltName: Full=NAD(+) ADP-ribosyltransferase 1; Short=ADPRT-1; AltName: Full=Poly[ADP-ribose] synthase 1 emb|CAA10482.
|
7.00005e-41
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: poly
|
0.0
|
|
Internal
|
|
biog3_v1.0_unigene787
|
biogeco3 v1.0
|
419
|
|
• AutoFact: Unassigned protein
|
|
|
• Blast2go: protein xri1
|
3.42395e-32
|
|
Putative coding
|
|
biog3_v1.0_unigene1434
|
biogeco3 v1.0
|
506
|
|
• AutoFact: Whole genome shotgun sequence of line PN40024, scaffold_8.assembly12x (Fragment) n=2 Tax=Vitis vinifera RepID=D7SV05_VITVI
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: histone-lysine n-methyltransferase
|
0.0
|
|
Complete
|
|
biog3_v1.0_unigene1448
|
biogeco3 v1.0
|
461
|
|
• AutoFact: Unassigned protein
|
|
|
• FL-Next: sp=Pumilio homolog 23; Arabidopsis thaliana (Mouse-ear cress).
|
0.0
|
|
• Blast2go: pumilio 23
|
0.0
|
|
Internal
|
|
biog3_v1.0_unigene1461
|
biogeco3 v1.0
|
646
|
|
• AutoFact: putative transcription initiation factor [Oryza sativa Japonica Group] gb|ABB46979.1| mutant TFIIF-alpha, putative, expressed [Oryza sativa Japonica Group]
|
2.0e-32
|
|
• FL-Next: Isoform 2 of Transcription initiation factor IIF subunit alpha OS=Arabidopsis thaliana GN=RAP74
|
0.0
|
|
• Blast2go: transcription initiation factor iif subunit alpha
|
7.42688e-44
|
|
C-terminus
|
|
biog3_v1.0_unigene1646
|
biogeco3 v1.0
|
1289
|
|
• AutoFact: Elongation factor 1-alpha n=193 Tax=Eukaryota RepID=EF1A_ARATH
|
0.0
|
|
• FL-Next: sp=Elongation factor 1-alpha; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: elongation factor 1-
|
0.0
|
|
C-terminus
|
|
biog3_v1.0_unigene1780
|
biogeco3 v1.0
|
1937
|
|
• AutoFact: Elongation factor 1-alpha n=193 Tax=Eukaryota RepID=EF1A_ARATH
|
0.0
|
|
• FL-Next: sp=Elongation factor 1-alpha; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: elongation factor 1-
|
0.0
|
|
Complete
|
|
biog3_v1.0_unigene2030
|
biogeco3 v1.0
|
470
|
|
• AutoFact: NON-SMC ELEMENT 3-like protein [Arabidopsis thaliana] gb|AAN86181.1| putative MAGE protein [Arabidopsis thaliana] dbj|BAH19687.1| AT1G34770 [Arabidopsis thaliana] gb|AEE31737.1| NON-SMC ELEMENT 3-like protein [Arabidopsis thaliana]
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: melanoma-associated antigen
|
0.0
|
|
C-terminus
|
|
biog3_v1.0_unigene2198
|
biogeco3 v1.0
|
236
|
|
• AutoFact: Alpha-L-fucosidase 1 n=3 Tax=Andropogoneae RepID=B6UDD6_MAIZE
|
0.0
|
|
• Blast2go: alpha-l-fucosidase 1
|
0.0
|
|
unknown
|
|
biog3_v1.0_unigene2831
|
biogeco3 v1.0
|
1021
|
|
• AutoFact: Whole genome shotgun sequence of line PN40024, scaffold_8.assembly12x (Fragment) n=2 Tax=Vitis vinifera RepID=D7SV05_VITVI
|
0.0
|
|
• FL-Next: Isoform 2 of Histone-lysine N-methyltransferase ATX1 OS=Arabidopsis thaliana GN=ATX1
|
0.0
|
|
• Blast2go: histone-lysine n-methyltransferase
|
0.0
|
|
Putative N-terminus
|
|
biog3_v1.0_unigene3115
|
biogeco3 v1.0
|
1693
|
|
• AutoFact: WS0284.B21_H03 SS-IB-A-FL-13 Picea sitchensis cDNA clone WS0284_H03 5, mRNA sequence.
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: basic leucine zipper and w2 domain-containing protein 2-like
|
0.0
|
|
Complete
|
|
biog3_v1.0_unigene3176
|
biogeco3 v1.0
|
1129
|
|
• AutoFact: Transcription factor IIA, alpha/beta subunit [Arabidopsis thaliana] ref|NP_172228.3| Transcription factor IIA, alpha/beta subunit [Arabidopsis thaliana] emb|CAA11525.1| transcription factor IIA large subunit [Arabidopsis thaliana] gb|AAR28029.1| TFIIA-L1
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: transcription factor transcription initiation factor
|
0.0
|
|
Putative C-terminus
|
|
biog3_v1.0_unigene3469
|
biogeco3 v1.0
|
189
|
|
• AutoFact: phenylalanyl-tRNA synthetase alpha chain [Arabidopsis thaliana] sp|Q9T034.3|SYFA_ARATH RecName: Full=Probable phenylalanyl-tRNA synthetase alpha chain; AltName: Full=Phenylalanine--tRNA ligase alpha chain; Short=PheRS gb|AAM19830.1| AT4g39280/T22F8_180 [A
|
0.0
|
|
• Blast2go: protein
|
0.0
|
|
unknown
|
|
biog3_v1.0_unigene3471
|
biogeco3 v1.0
|
522
|
|
• AutoFact: ubiquitin-protein ligase UBR7 [Arabidopsis thaliana] ref|NP_974600.1| ubiquitin-protein ligase UBR7 [Arabidopsis thaliana] ref|NP_001078436.1| ubiquitin-protein ligase UBR7 [Arabidopsis thaliana] dbj|BAH30533.1| hypothetical protein [Arabidopsis thaliana]
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape).
|
0.0
|
|
• Blast2go: ubiquitin-protein ligase ubr7
|
0.0
|
|
Internal
|
|
biog3_v1.0_unigene3813
|
biogeco3 v1.0
|
247
|
|
• AutoFact: Lysyl-tRNA synthetase (Fragment) n=6 Tax=Magnoliophyta RepID=D7U9T8_VITVI
|
0.0
|
|
• Blast2go: lysyl-trna synthetase
|
0.0
|
|
unknown
|
|
biog3_v1.0_unigene4761
|
biogeco3 v1.0
|
413
|
|
• AutoFact: Unassigned protein
|
|
|
• FL-Next: Isoform 2 of Pumilio homolog 23 OS=Arabidopsis thaliana GN=APUM23
|
0.0
|
|
• Blast2go: pumilio 23
|
0.0
|
|
Internal
|
|
biog3_v1.0_unigene5336
|
biogeco3 v1.0
|
300
|
|
• AutoFact: ubiquitin-protein ligase UBR7 [Arabidopsis thaliana] ref|NP_974600.1| ubiquitin-protein ligase UBR7 [Arabidopsis thaliana] ref|NP_001078436.1| ubiquitin-protein ligase UBR7 [Arabidopsis thaliana] dbj|BAH30533.1| hypothetical protein [Arabidopsis thaliana]
|
0.0
|
|
• Blast2go: ubiquitin-protein ligase ubr7
|
0.0
|
|
Putative coding
|
|
biog3_v1.0_unigene5511
|
biogeco3 v1.0
|
389
|
|
• AutoFact: protein kinase domain-containing protein [Arabidopsis thaliana] gb|AAM19803.1| At1g74320/F1O17_1 [Arabidopsis thaliana] gb|AAM98234.1| putative choline kinase [Arabidopsis thaliana] gb|AAP42750.1| At1g74320 [Arabidopsis thaliana] gb|AEE35577.1| protein ki
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: choline ethanolamine kinase
|
0.0
|
|
Internal
|
|
biog3_v1.0_unigene5803
|
biogeco3 v1.0
|
347
|
|
• AutoFact: Tetratricopeptide repeat-containing protein n=4 Tax=Arabidopsis RepID=F4HS99_ARATH
|
5.0e-25
|
|
• FL-Next: tr=Tetratricopeptide repeat-containing protein; Arabidopsis lyrata subsp. lyrata (Lyre-leaved rock-cress).
|
0.0
|
|
• Blast2go: tetratricopeptide repeat-containing protein
|
4.33558e-30
|
|
Internal
|
