Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: biogeco3 v1.0

Name: primary metabolic process

Term: GO:0044238  Help

Source: GO from Blast2go

Ontology: Biological Process

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
biog3_v1.0_unigene14237 biogeco3 v1.0 349
• AutoFact: glutamate-ammonia ligase-like protein [Arabidopsis thaliana] gb|AEE79045.1| glutamate-ammonia ligase-like protein [Arabidopsis thaliana] 0.0
• Blast2go: protein 0.0
unknown
biog3_v1.0_unigene14611 biogeco3 v1.0 366
• AutoFact: putative chromodomain-helicase-DNA-binding protein [Arabidopsis thaliana] 0.0
• FL-Next: sp=CHD3-type chromatin-remodeling factor PICKLE; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: chromatin remodeling complex subunit 0.0
Internal
biog3_v1.0_unigene14958 biogeco3 v1.0 264
• AutoFact: putative chromodomain-helicase-DNA-binding protein [Arabidopsis thaliana] 0.0
• Blast2go: chromatin remodeling complex subunit 0.0
Putative coding
biog3_v1.0_unigene15185 biogeco3 v1.0 217
• AutoFact: Alpha-L-fucosidase 1 n=3 Tax=Andropogoneae RepID=B6UDD6_MAIZE 0.0
• FL-Next: sp=Alpha-L-fucosidase 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: alpha-l-fucosidase 1 0.0
Internal
biog3_v1.0_unigene15506 biogeco3 v1.0 326
• AutoFact: PREDICTED: similar to cytokinin receptor 1 n=1 Tax=Vitis vinifera RepID=UPI00019828F5 0.0
• FL-Next: sp=Histidine kinase 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: histidine kinase cytokinin receptor 0.0
C-terminus
biog3_v1.0_unigene15780 biogeco3 v1.0 337
• AutoFact: negative regulator of systemic acquired resistance (SNI1) [Arabidopsis thaliana] gb|AAD50900.1|AF169596_1 negative regulator of systemic acquired resistance SNI1 [Arabidopsis thaliana] gb|ABJ17147.1| At4g18470 [Arabidopsis thaliana] gb|AEE84048.1| negativ 7.0e-19
• FL-Next: tr=Putative uncharacterized protein; Ricinus communis (Castor bean). 0.0
• Blast2go: negative regulator of systemic acquired resistance 8.51674e-28
Internal
biog3_v1.0_unigene15954 biogeco3 v1.0 320
• AutoFact: Transcription factor IIA, alpha/beta subunit [Arabidopsis thaliana] ref|NP_172228.3| Transcription factor IIA, alpha/beta subunit [Arabidopsis thaliana] emb|CAA11525.1| transcription factor IIA large subunit [Arabidopsis thaliana] gb|AAR28029.1| TFIIA-L1 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: transcription factor transcription initiation factor 0.0
Putative N-terminus
biog3_v1.0_unigene16008 biogeco3 v1.0 345
• AutoFact: Unassigned protein
• FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
• Blast2go: glycosyl hydrolase family 35 protein 3.2191e-14
Putative Complete
biog3_v1.0_unigene16237 biogeco3 v1.0 354
• AutoFact: Whole genome shotgun sequence of line PN40024, scaffold_8.assembly12x (Fragment) n=2 Tax=Vitis vinifera RepID=D7SV05_VITVI 0.0
• FL-Next: sp=Histone-lysine N-methyltransferase ATX3; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: histone-lysine n-methyltransferase 0.0
Internal
biog3_v1.0_unigene17137 biogeco3 v1.0 292
• AutoFact: [C] COG0584 Glycerophosphoryl diester phosphodiesterase 8.0e-21
• FL-Next: sp=Probable glycerophosphoryl diester phosphodiesterase 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: protein 0.0
Putative N-terminus
biog3_v1.0_unigene17181 biogeco3 v1.0 237
• AutoFact: SKP1-interacting partner 15 n=2 Tax=Arabidopsis RepID=SKI15_ARATH 0.0
• Blast2go: f-box family protein 0.0
unknown
biog3_v1.0_unigene18879 biogeco3 v1.0 295
• AutoFact: Phytochrome-associated serine/threonine protein phosphatase 3 n=13 Tax=Embryophyta RepID=FYPP3_ARATH 0.0
• Blast2go: phosphoprotein phosphatase 0.0
unknown
biog3_v1.0_unigene19531 biogeco3 v1.0 70
• AutoFact: glutamate-ammonia ligase-like protein [Arabidopsis thaliana] gb|AEE79045.1| glutamate-ammonia ligase-like protein [Arabidopsis thaliana] 0.0
• FL-Next: tr=Protein fluG, putative; Ricinus communis (Castor bean). 0.0
• Blast2go: protein 0.0
Internal
biog3_v1.0_unigene19918 biogeco3 v1.0 302
• AutoFact: ubiquitin-protein ligase UBR7 [Arabidopsis thaliana] ref|NP_974600.1| ubiquitin-protein ligase UBR7 [Arabidopsis thaliana] ref|NP_001078436.1| ubiquitin-protein ligase UBR7 [Arabidopsis thaliana] dbj|BAH30533.1| hypothetical protein [Arabidopsis thaliana] 1.0e-08
• Blast2go: ubiquitin-protein ligase ubr7 2.84357e-12
unknown
biog3_v1.0_unigene20278 biogeco3 v1.0 368
• AutoFact: Unassigned protein
• Blast2go: aspartate glutamate uridylate kinase-like protein 0.0
unknown
biog3_v1.0_unigene21852 biogeco3 v1.0 211
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Selaginella moellendorffii (Spikemoss). 0.0
• Blast2go: protein xri1 3.42395e-32
Putative N-terminus
biog3_v1.0_unigene22441 biogeco3 v1.0 295
• AutoFact: Unassigned protein
• Blast2go: protein xri1 3.42395e-32
unknown
biog3_v1.0_unigene22453 biogeco3 v1.0 148
• AutoFact: Protein binding protein, putative n=1 Tax=Ricinus communis RepID=B9SEH0_RICCO 0.0
• Blast2go: protein decapping 5 0.0
unknown
biog3_v1.0_unigene23446 biogeco3 v1.0 285
• AutoFact: negative regulator of systemic acquired resistance (SNI1) [Arabidopsis thaliana] gb|AAD50900.1|AF169596_1 negative regulator of systemic acquired resistance SNI1 [Arabidopsis thaliana] gb|ABJ17147.1| At4g18470 [Arabidopsis thaliana] gb|AEE84048.1| negativ 7.0e-19
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: negative regulator of systemic acquired resistance 8.51674e-28
N-terminus
biog3_v1.0_unigene24491 biogeco3 v1.0 320
• AutoFact: RecName: Full=Glutaminyl-tRNA synthetase; AltName: Full=Glutamine--tRNA ligase; Short=GlnRS emb|CAA62901.1| tRNA-glutamine synthetase [Lupinus luteus] 1.0e-38
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: trna-glutamine synthetase 0.0
Internal

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain