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Assembly Name: biogeco3 v1.0

Name: cell part

Term: GO:0044464  Help

Source: GO from Blast2go

Ontology: Cellular Component


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog3_v1.0_unigene257 biogeco3 v1.0 444
AutoFact: DUF1191 domain containing protein 0.0
FL-Next: tr=Putative uncharacterized protein; Selaginella moellendorffii (Spikemoss). 0.0
Blast2go: protein 1.63383e-32
C-terminus
biog3_v1.0_unigene421 biogeco3 v1.0 754
AutoFact: no exine formation 1 [Arabidopsis thaliana] emb|CAB87146.1| putative protein [Arabidopsis thaliana] dbj|BAD26730.1| no exine formation-1 [Arabidopsis thaliana] gb|AED91889.1| no exine formation 1 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Arabidopsis lyrata subsp. lyrata (Lyre-leaved rock-cress). 0.0
Blast2go: protein 0.0
Internal
biog3_v1.0_unigene955 biogeco3 v1.0 603
AutoFact: PQ-loop repeat family protein / transmembrane family protein [Arabidopsis thaliana] gb|AAK76703.1| unknown protein [Arabidopsis thaliana] gb|AEE86709.1| PQ-loop repeat family protein / transmembrane family protein [Arabidopsis thaliana] 0.0
FL-Next: tr=PQ-loop repeat family protein; Arabidopsis lyrata subsp. lyrata (Lyre-leaved rock-cress). 0.0
Blast2go: uncharacterized membrane protein yol092w-like 0.0
C-terminus
biog3_v1.0_unigene1114 biogeco3 v1.0 834
AutoFact: PQ-loop repeat family protein / transmembrane family protein [Arabidopsis thaliana] gb|AAK76703.1| unknown protein [Arabidopsis thaliana] gb|AEE86709.1| PQ-loop repeat family protein / transmembrane family protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Blast2go: uncharacterized membrane protein yol092w-like 0.0
Internal
biog3_v1.0_unigene2044 biogeco3 v1.0 685
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: uncharacterized protein at1g76660-like 0.0
Putative N-terminus
biog3_v1.0_unigene2220 biogeco3 v1.0 804
AutoFact: Receptor-kinase isolog n=6 Tax=Arabidopsis RepID=Q56ZA8_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: receptor-kinase isolog 0.0
Putative C-terminus
biog3_v1.0_unigene2291 biogeco3 v1.0 270
AutoFact: Cell division protease ftsH, putative n=1 Tax=Ricinus communis RepID=B9SIY9_RICCO 7.0e-15
FL-Next: tr=Cell division protease ftsH, putative; Ricinus communis (Castor bean). 0.0
Blast2go: cell division protein 2.99402e-16
Putative C-terminus
biog3_v1.0_unigene2554 biogeco3 v1.0 418
AutoFact: ABC transporter G family member 21 [Arabidopsis thaliana] sp|Q7XA72.2|AB21G_ARATH RecName: Full=ABC transporter G family member 21; Short=ABC transporter ABCG.21; Short=AtABCG21; AltName: Full=White-brown complex homolog protein 21; Short=AtWBC21 dbj|BAB0 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: white-brown-complex abc transporter family 0.0
Internal
biog3_v1.0_unigene2690 biogeco3 v1.0 295
AutoFact: Signal peptidase complex subunit, putative n=1 Tax=Ricinus communis RepID=B9RMF9_RICCO 3.0e-24
Blast2go: probable signal peptidase complex subunit 1-like 0.0
unknown
biog3_v1.0_unigene3154 biogeco3 v1.0 216
AutoFact: UBA-like [Medicago truncatula] 0.0
Blast2go: ubiquitin-associated protein 0.0
unknown
biog3_v1.0_unigene3174 biogeco3 v1.0 1769
AutoFact: [U] COG0201 Preprotein translocase subunit SecY 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein transport protein sec61 subunit alpha 0.0
Complete
biog3_v1.0_unigene3788 biogeco3 v1.0 2645
AutoFact: putative transmembrane protein kinase [Oryza sativa Japonica Group] dbj|BAD67663.1| putative transmembrane protein kinase [Oryza sativa Japonica Group] gb|EEC79921.1| hypothetical protein OsI_21484 [Oryza sativa Indica Group] 0.0
FL-Next: tr=Clavata-like receptor; Picea glauca (White spruce) (Pinus glauca). 0.0
Blast2go: lrr receptor-like serine threonine-protein kinase erecta-like 0.0
C-terminus
biog3_v1.0_unigene4021 biogeco3 v1.0 443
AutoFact: ER lumen protein retaining receptor n=1 Tax=Picea sitchensis RepID=A9NZ34_PICSI 0.0
FL-Next: sp=ER lumen protein retaining receptor; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Internal
biog3_v1.0_unigene4054 biogeco3 v1.0 239
AutoFact: putrescine-binding periplasmic protein-like protein [Arabidopsis thaliana] gb|AAU05535.1| At1g31410 [Arabidopsis thaliana] gb|AEE31352.1| putrescine-binding periplasmic protein-like protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Blast2go: protein 0.0
Internal
biog3_v1.0_unigene4073 biogeco3 v1.0 631
AutoFact: AA_permease multi-domain protein 1.0e-06
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: protein 0.0
C-terminus
biog3_v1.0_unigene4096 biogeco3 v1.0 475
AutoFact: Bidirectional sugar transporter SWEET3b n=1 Tax=Oryza sativa Japonica Group RepID=SWT3B_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: nodulin 3 family protein 0.0
Internal
biog3_v1.0_unigene4337 biogeco3 v1.0 1280
AutoFact: ER lumen protein-retaining receptor-like [Oryza sativa Japonica Group] gb|EEC84948.1| hypothetical protein OsI_32165 [Oryza sativa Indica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: er lumen protein retaining receptor-like 0.0
Complete
biog3_v1.0_unigene4576 biogeco3 v1.0 956
AutoFact: Ormdl, putative n=2 Tax=rosids RepID=B9SBD8_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: orm1-like protein 2 0.0
Putative Complete
biog3_v1.0_unigene4650 biogeco3 v1.0 328
AutoFact: PREDICTED: similar to PDF n=1 Tax=Vitis vinifera RepID=UPI0001984437 2.0e-29
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protodermal factor 0.0
Internal
biog3_v1.0_unigene4700 biogeco3 v1.0 892
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: uncharacterized protein at1g76660-like 0.0
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain