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Assembly Name: biogeco3 v1.0

Name: cytoplasmic part

Term: GO:0044444  Help

Source: GO from Blast2go

Ontology: Cellular Component


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog3_v1.0_unigene19197 biogeco3 v1.0 245
AutoFact: CRS2-associated factor 1, chloroplastic precursor [Zea mays] sp|Q84N49.1|CAF1P_MAIZE RecName: Full=CRS2-associated factor 1, chloroplastic; AltName: Full=Chloroplastic group IIA intron splicing facilitator CRS2-associated factor 1; Flags: Precursor gb|AAP 4.0e-07
Blast2go: crs2-associated factor 1 1.45536e-12
unknown
biog3_v1.0_unigene19706 biogeco3 v1.0 267
AutoFact: CRS2-associated factor 1, chloroplastic precursor [Zea mays] sp|Q84N49.1|CAF1P_MAIZE RecName: Full=CRS2-associated factor 1, chloroplastic; AltName: Full=Chloroplastic group IIA intron splicing facilitator CRS2-associated factor 1; Flags: Precursor gb|AAP 4.0e-07
Blast2go: crs2-associated factor 1 1.45536e-12
Putative coding
biog3_v1.0_unigene20031 biogeco3 v1.0 282
AutoFact: FPL domain containing protein 7.0e-26
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: protein 0.0
Internal
biog3_v1.0_unigene20136 biogeco3 v1.0 296
AutoFact: Unassigned protein
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Blast2go: protein 0.0
Internal
biog3_v1.0_unigene20592 biogeco3 v1.0 427
AutoFact: myosin heavy chain-related protein [Arabidopsis thaliana] gb|AEE85894.1| myosin heavy chain-related protein [Arabidopsis thaliana] 9.0e-10
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: protein 3.28213e-17
Internal
biog3_v1.0_unigene21610 biogeco3 v1.0 175
AutoFact: Nuclear matrix constituent-like protein 1 n=1 Tax=Cucumis melo subsp. melo RepID=E5GCT1_CUCME 8.0e-24
FL-Next: sp=Putative nuclear matrix constituent protein 1-like protein; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: nuclear matrix constituent protein 1-like 1.51165e-30
Internal
biog3_v1.0_unigene22520 biogeco3 v1.0 96
AutoFact: Protein regulator of cytokinesis, putative n=1 Tax=Ricinus communis RepID=B9RHR0_RICCO 0.0
Blast2go: 65-kda microtubule-associated protein 3-like 0.0
unknown
biog3_v1.0_unigene22858 biogeco3 v1.0 246
AutoFact: SRC2 protein n=1 Tax=Taiwania cryptomerioides RepID=A7XAJ8_9CONI 5.0e-40
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: src2-like protein 0.0
Internal
biog3_v1.0_unigene24139 biogeco3 v1.0 198
AutoFact: Protein phosphatase 1 regulatory subunit inhibitor-3 n=1 Tax=Vicia faba RepID=C4B4E6_VICFA 6.0e-12
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein phosphatase 1 regulatory subunit inhibitor-3 0.0
Internal
biog3_v1.0_unigene24811 biogeco3 v1.0 1181
AutoFact: PREDICTED: similar to synaptotagmin binding, cytoplasmic RNA interacting protein, isoform 1 [Ornithorhynchus anatinus] 3.0e-31
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: heterogeneous nuclear ribonucleoprotein q 0.0
Complete
biog3_v1.0_unigene25371 biogeco3 v1.0 143
AutoFact: FPL domain containing protein 7.0e-26
Blast2go: protein 0.0
unknown
biog3_v1.0_unigene25643 biogeco3 v1.0 1227
AutoFact: ADP-ribosylation factor [Medicago sativa] emb|CAI29265.1| ADP-ribosylation factor 1 [Medicago truncatula] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: adp-ribosylation factor 0.0
Complete
biog3_v1.0_unigene25691 biogeco3 v1.0 723
AutoFact: Mitochondrial transcription termination factor family protein [Arabidopsis thaliana] dbj|BAA97307.1| unnamed protein product [Arabidopsis thaliana] gb|AED97974.1| Mitochondrial transcription termination factor family protein [Arabidopsis thaliana] 5.0e-24
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: mitochondrial transcription termination factor family protein 0.0
C-terminus
biog3_v1.0_unigene25761 biogeco3 v1.0 426
AutoFact: GTP-binding protein SAR1A n=5 Tax=Embryophyta RepID=B4FPT6_MAIZE 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: gtp-binding protein sar1a 0.0
N-terminus
biog3_v1.0_unigene25986 biogeco3 v1.0 547
AutoFact: CRS2-associated factor 1, chloroplastic precursor [Zea mays] sp|Q84N49.1|CAF1P_MAIZE RecName: Full=CRS2-associated factor 1, chloroplastic; AltName: Full=Chloroplastic group IIA intron splicing facilitator CRS2-associated factor 1; Flags: Precursor gb|AAP 4.0e-07
Blast2go: crs2-associated factor 1 1.45536e-12
unknown
biog3_v1.0_unigene26025 biogeco3 v1.0 365
AutoFact: CRS2-associated factor 1, chloroplastic precursor [Zea mays] sp|Q84N49.1|CAF1P_MAIZE RecName: Full=CRS2-associated factor 1, chloroplastic; AltName: Full=Chloroplastic group IIA intron splicing facilitator CRS2-associated factor 1; Flags: Precursor gb|AAP 4.0e-07
Blast2go: crs2-associated factor 1 1.45536e-12
unknown

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain