Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: biogeco3 v1.0

Name: cytoplasmic part

Term: GO:0044444  Help

Source: GO from Blast2go

Ontology: Cellular Component

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
biog3_v1.0_unigene9091 biogeco3 v1.0 257
• AutoFact: SAP domain-containing protein [Arabidopsis thaliana] ref|NP_001078515.1| SAP domain-containing protein [Arabidopsis thaliana] emb|CAA18754.1| putative protein [Arabidopsis thaliana] emb|CAB80631.1| putative protein [Arabidopsis thaliana] gb|AEE87103.1| SA 0.0
• Blast2go: sap domain-containing protein 0.0
unknown
biog3_v1.0_unigene9155 biogeco3 v1.0 503
• AutoFact: aspartyl protease family protein [Arabidopsis thaliana] gb|AAK25903.1|AF360193_1 unknown protein [Arabidopsis thaliana] emb|CAB43423.1| putative protein [Arabidopsis thaliana] gb|AAK64083.1| unknown protein [Arabidopsis thaliana] gb|AAK96717.1| Unknown pr 4.0e-26
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: aspartic proteinase nepenthesin-2-like 1.26029e-38
N-terminus
biog3_v1.0_unigene9730 biogeco3 v1.0 1278
• AutoFact: Luminal binding protein n=3 Tax=Pinaceae RepID=Q40924_PSEMZ 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: luminal binding protein 0.0
C-terminus
biog3_v1.0_unigene10208 biogeco3 v1.0 322
• AutoFact: ribosomal protein L34e-like protein [Arabidopsis thaliana] gb|AAS76274.1| At3g01170 [Arabidopsis thaliana] dbj|BAD43016.1| unknown protein [Arabidopsis thaliana] dbj|BAF01163.1| hypothetical protein [Arabidopsis thaliana] gb|AEE73619.1| ribosomal protein 6.0e-30
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: 60s ribosomal protein 0.0
Internal
biog3_v1.0_unigene10684 biogeco3 v1.0 1250
• AutoFact: Nuclear matrix constituent-like protein 1 n=1 Tax=Cucumis melo subsp. melo RepID=E5GCT1_CUCME 8.0e-24
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: nuclear matrix constituent protein 1-like 1.51165e-30
N-terminus
biog3_v1.0_unigene10858 biogeco3 v1.0 1200
• AutoFact: GTP-binding protein SAR1A n=5 Tax=Embryophyta RepID=B4FPT6_MAIZE 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: gtp-binding protein sar1a 0.0
Complete
biog3_v1.0_unigene11188 biogeco3 v1.0 1099
• AutoFact: mitochondrial transcription termination factor-like [Oryza sativa Japonica Group] 1.0e-25
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
N-terminus
biog3_v1.0_unigene11773 biogeco3 v1.0 1050
• AutoFact: Luminal binding protein n=3 Tax=Pinaceae RepID=Q40924_PSEMZ 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: luminal binding protein 0.0
N-terminus
biog3_v1.0_unigene11834 biogeco3 v1.0 309
• AutoFact: PREDICTED: similar to synaptotagmin binding, cytoplasmic RNA interacting protein, isoform 1 [Ornithorhynchus anatinus] 3.0e-31
• FL-Next: tr=Putative uncharacterized protein; Zea mays (Maize). 0.0
• Blast2go: heterogeneous nuclear ribonucleoprotein q 0.0
Internal
biog3_v1.0_unigene13238 biogeco3 v1.0 454
• AutoFact: SAP domain-containing protein [Arabidopsis thaliana] ref|NP_001078515.1| SAP domain-containing protein [Arabidopsis thaliana] emb|CAA18754.1| putative protein [Arabidopsis thaliana] emb|CAB80631.1| putative protein [Arabidopsis thaliana] gb|AEE87103.1| SA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: sap domain-containing protein 0.0
Internal
biog3_v1.0_unigene13527 biogeco3 v1.0 687
• AutoFact: Ribosomal protein S13, mitochondrial n=14 Tax=Magnoliophyta RepID=RT13_DAUCA 3.99931e-42
• FL-Next: sp=Ribosomal protein S13, mitochondrial; Nicotiana tabacum (Common tobacco). Mitochondrion. 0.0
• Blast2go: ribosomal protein s13 5.00264e-43
N-terminus
biog3_v1.0_unigene13691 biogeco3 v1.0 204
• AutoFact: Luminal binding protein n=3 Tax=Pinaceae RepID=Q40924_PSEMZ 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: luminal binding protein 0.0
Internal
biog3_v1.0_unigene13937 biogeco3 v1.0 225
• AutoFact: 3-hydroxyisobutyryl-CoA hydrolase 1 [Arabidopsis thaliana] sp|Q9LKJ1.1|HIBC1_ARATH RecName: Full=3-hydroxyisobutyryl-CoA hydrolase 1; AltName: Full=CoA-thioester hydrolase CHY1 gb|AAF77193.1|AF276301_1 CoA-thioester hydrolase CHY1 [Arabidopsis thaliana] d 0.0
• Blast2go: 3-hydroxyisobutyryl-coenzyme a expressed 0.0
unknown
biog3_v1.0_unigene14100 biogeco3 v1.0 289
• AutoFact: SAP domain-containing protein [Arabidopsis thaliana] ref|NP_001078515.1| SAP domain-containing protein [Arabidopsis thaliana] emb|CAA18754.1| putative protein [Arabidopsis thaliana] emb|CAB80631.1| putative protein [Arabidopsis thaliana] gb|AEE87103.1| SA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: sap domain-containing protein 0.0
N-terminus
biog3_v1.0_unigene14504 biogeco3 v1.0 322
• AutoFact: Probable galacturonosyltransferase 7 n=2 Tax=Arabidopsis RepID=GAUT7_ARATH 2.0e-22
• Blast2go: alpha- -galacturonosyltransferase 3.64835e-26
Putative coding
biog3_v1.0_unigene15808 biogeco3 v1.0 336
• AutoFact: AP-4 complex subunit sigma n=7 Tax=rosids RepID=AP4S_ARATH 0.0
• Blast2go: ap-4 complex subunit sigma-1 0.0
unknown
biog3_v1.0_unigene15864 biogeco3 v1.0 339
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: uncharacterized protein 0.0
Internal
biog3_v1.0_unigene16565 biogeco3 v1.0 129
• AutoFact: SRC2 protein n=1 Tax=Taiwania cryptomerioides RepID=A7XAJ8_9CONI 1.99965e-42
• Blast2go: protein 0.0
unknown
biog3_v1.0_unigene17915 biogeco3 v1.0 242
• AutoFact: Nuclear matrix constituent-like protein 1 n=1 Tax=Cucumis melo subsp. melo RepID=E5GCT1_CUCME 8.0e-24
• Blast2go: nuclear matrix constituent protein 1-like 1.51165e-30
unknown
biog3_v1.0_unigene18377 biogeco3 v1.0 288
• AutoFact: nucleotide-diphospho-sugar transferase [Arabidopsis thaliana] gb|AEE36384.1| nucleotide-diphospho-sugar transferase [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: n-acetylglucosaminyltransferase-like protein 0.0
Internal

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain