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Assembly Name: biogeco3 v1.0

Name: pentatricopeptide repeat-containing protein chloroplastic-like

Source: Description from Blast2go

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
biog3_v1.0_unigene1281 biogeco3 v1.0 459
• AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9SY02.1|PP301_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g02750 gb|AAD15348.1| hypothetical protein [Arabidopsis thaliana] emb|CAB77760.1| hypothetical protein 2.0e-40
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing protein chloroplastic-like 0.0
Internal
biog3_v1.0_unigene7546 biogeco3 v1.0 463
• AutoFact: Pentatricopeptide repeat-containing protein, putative n=1 Tax=Ricinus communis RepID=B9RAT8_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing protein chloroplastic-like 0.0
Internal
biog3_v1.0_unigene15309 biogeco3 v1.0 382
• AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q0WLC6.2|PP349_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g34830, chloroplastic; Flags: Precursor gb|AEE86426.1| pentatricopeptide repeat-containing protein [Ara 9.94922e-44
• FL-Next: sp=Pentatricopeptide repeat-containing protein At4g34830, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: pentatricopeptide repeat-containing protein chloroplastic-like 0.0
Putative C-terminus
biog3_v1.0_unigene17608 biogeco3 v1.0 276
• AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q0WLC6.2|PP349_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g34830, chloroplastic; Flags: Precursor gb|AEE86426.1| pentatricopeptide repeat-containing protein [Ara 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing protein chloroplastic-like 0.0
Putative C-terminus
biog3_v1.0_unigene18470 biogeco3 v1.0 213
• AutoFact: PREDICTED: similar to Tetratricopeptide-like helical n=1 Tax=Vitis vinifera RepID=UPI0001984A05 2.0e-27
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing protein chloroplastic-like 1.52049e-38
Putative N-terminus
biog3_v1.0_unigene18747 biogeco3 v1.0 404
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing protein chloroplastic-like 0.0
C-terminus
biog3_v1.0_unigene19700 biogeco3 v1.0 146
• AutoFact: Unassigned protein
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing protein chloroplastic-like 7.69149e-12
Internal
biog3_v1.0_unigene20157 biogeco3 v1.0 322
• AutoFact: Pentatricopeptide repeat-containing protein, putative n=1 Tax=Ricinus communis RepID=B9SPW1_RICCO 2.0e-06
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing protein chloroplastic-like 4.94834e-12
Putative N-terminus
biog3_v1.0_unigene22244 biogeco3 v1.0 274
• AutoFact: Pentatricopeptide repeat-containing protein, putative n=1 Tax=Ricinus communis RepID=B9SGR5_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing protein chloroplastic-like 0.0
Internal
biog3_v1.0_unigene22456 biogeco3 v1.0 558
• AutoFact: Pentatricopeptide repeat protein 78 (Fragment) n=1 Tax=Funaria hygrometrica RepID=F5CAE0_FUNHY 9.94922e-44
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing protein chloroplastic-like 0.0
Putative N-terminus
biog3_v1.0_unigene22723 biogeco3 v1.0 417
• AutoFact: pentatricopeptide repeat-containing protein [Arabidopsis thaliana] sp|Q9SF38.1|PP222_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g09650, chloroplastic; AltName: Full=Protein HIGH CHLOROPHYLL FLUORESCENCE 152; Flags: Precursor gb|AAF 4.0e-30
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing protein chloroplastic-like 2.8333e-36
Internal
biog3_v1.0_unigene23628 biogeco3 v1.0 340
• AutoFact: pfam01535, PPR, PPR repeat 1.0e-06
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: pentatricopeptide repeat-containing protein chloroplastic-like 2.44407e-30
Internal
biog3_v1.0_unigene25241 biogeco3 v1.0 457
• AutoFact: Unassigned protein
• FL-Next: sp=Pentatricopeptide repeat-containing protein At5g67570, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: pentatricopeptide repeat-containing protein chloroplastic-like 4.78876e-28
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain