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Assembly Name: biogeco3 v1.0

Name: ligase activity

Term: GO:0016874  Help

Source: GO from Blast2go

Ontology: Molecular Function


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog3_v1.0_unigene365 biogeco3 v1.0 526
AutoFact: PREDICTED: similar to KAK (KAKTUS) isoform 1 n=2 Tax=Vitis vinifera RepID=UPI0001982DD6 0.0
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Blast2go: e3 ubiquitin-protein ligase upl3-like 0.0
Complete
biog3_v1.0_unigene444 biogeco3 v1.0 758
AutoFact: Ubiquitin carrier protein n=2 Tax=Picea RepID=A9NRG7_PICSI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ubiquitin-conjugating enzyme e2 i 0.0
Complete
biog3_v1.0_unigene530 biogeco3 v1.0 377
AutoFact: Unassigned protein
FL-Next: sp=F-box/kelch-repeat protein At1g51550; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein 0.0
Internal
biog3_v1.0_unigene623 biogeco3 v1.0 1136
AutoFact: RecName: Full=Alpha-glucan water dikinase, chloroplastic; AltName: Full=Starch-related R1 protein; Flags: Precursor emb|CAA70725.1| R1 [Solanum tuberosum] 0.0
FL-Next: sp=Alpha-glucan water dikinase 1, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: alpha-glucan water chloroplastic-like 0.0
Internal
biog3_v1.0_unigene665 biogeco3 v1.0 413
AutoFact: U-box domain-containing protein 43 [Arabidopsis thaliana] ref|NP_001077833.1| U-box domain-containing protein 43 [Arabidopsis thaliana] sp|Q9SFX2.1|PUB43_ARATH RecName: Full=U-box domain-containing protein 43; AltName: Full=Plant U-box protein 43 gb|AAF16 3.0e-26
FL-Next: Isoform 2 of U-box domain-containing protein 44 OS=Arabidopsis thaliana GN=PUB44 0.0
Blast2go: u-box domain-containing protein 0.0
Internal
biog3_v1.0_unigene687 biogeco3 v1.0 456
AutoFact: Aminoimidazole ribonucleotide carboxylase n=2 Tax=Physcomitrella patens RepID=A5A0Q9_9BRYO 0.0
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: phosphoribosylaminoimidazole carboxylase 0.0
Internal
biog3_v1.0_unigene1192 biogeco3 v1.0 654
AutoFact: acyl-activating enzyme 17 [Arabidopsis thaliana] gb|AED93113.1| acyl-activating enzyme 17 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: acyl-activating enzyme 17 0.0
C-terminus
biog3_v1.0_unigene1238 biogeco3 v1.0 277
AutoFact: Long-chain acyl-CoA synthetase 4 n=2 Tax=Ricinus communis RepID=B3TZ27_RICCO 0.0
FL-Next: sp=Long chain acyl-CoA synthetase 2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: annotation was added to scaffolds in november 2011~long-chain-fatty-acid- ligase 0.0
Internal
biog3_v1.0_unigene2088 biogeco3 v1.0 348
AutoFact: magnesium chelatase subunit [Glycine max] 0.0
FL-Next: tr=Magnesium-chelatase subunit H, putative; Ricinus communis (Castor bean). 0.0
Blast2go: magnesium chelatase h subunit 0.0
Internal
biog3_v1.0_unigene2147 biogeco3 v1.0 372
AutoFact: armadillo/beta-catenin-like repeat-containing protein [Arabidopsis thaliana] ref|NP_001190883.1| armadillo/beta-catenin-like repeat-containing protein [Arabidopsis thaliana] emb|CAB40759.1| putative protein [Arabidopsis thaliana] emb|CAB79907.1| putative 2.0e-12
FL-Next: tr=Putative uncharacterized protein; subsp. trichocarpa). 0.0
Blast2go: armadillo beta-catenin-like repeat-containing protein 2.22157e-14
C-terminus
biog3_v1.0_unigene2223 biogeco3 v1.0 665
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Internal
biog3_v1.0_unigene2923 biogeco3 v1.0 854
AutoFact: Long-chain acyl-CoA synthetase 4 n=2 Tax=Ricinus communis RepID=B3TZ27_RICCO 0.0
FL-Next: sp=Long chain acyl-CoA synthetase 5; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: annotation was added to scaffolds in november 2011~long-chain-fatty-acid- ligase 0.0
N-terminus
biog3_v1.0_unigene3141 biogeco3 v1.0 870
AutoFact: KAP domain containing protein 2.0e-05
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: armadillo beta-catenin-like repeat-containing protein 0.0
Putative N-terminus
biog3_v1.0_unigene3503 biogeco3 v1.0 512
AutoFact: PREDICTED: similar to KAK (KAKTUS) isoform 1 n=2 Tax=Vitis vinifera RepID=UPI0001982DD6 0.0
Blast2go: e3 ubiquitin-protein ligase upl3-like 0.0
unknown
biog3_v1.0_unigene3580 biogeco3 v1.0 973
AutoFact: Ubiquitin-conjugating enzyme 13, E2 n=3 Tax=Embryophyta RepID=D8QMV8_SELML 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Complete
biog3_v1.0_unigene3705 biogeco3 v1.0 284
AutoFact: Unassigned protein
FL-Next: sp=F-box/kelch-repeat protein At1g51550; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein 0.0
Putative N-terminus
biog3_v1.0_unigene3935 biogeco3 v1.0 518
AutoFact: C2 domain containing protein 1.0e-10
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: protein 0.0
Internal
biog3_v1.0_unigene4709 biogeco3 v1.0 429
AutoFact: acyl-activating enzyme 17 [Arabidopsis thaliana] gb|AED93113.1| acyl-activating enzyme 17 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: acyl-activating enzyme 17 0.0
Internal
biog3_v1.0_unigene5219 biogeco3 v1.0 655
AutoFact: RecName: Full=Glutaminyl-tRNA synthetase; AltName: Full=Glutamine--tRNA ligase; Short=GlnRS emb|CAA62901.1| tRNA-glutamine synthetase [Lupinus luteus] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: glutaminyl-trna synthetase 0.0
Internal
biog3_v1.0_unigene5506 biogeco3 v1.0 381
AutoFact: Ubiquitin-activating enzyme E1 n=1 Tax=Physcomitrella patens subsp. patens RepID=A9T3V0_PHYPA 0.0
FL-Next: sp=Ubiquitin-activating enzyme E1 2; Triticum aestivum (Wheat). 0.0
Blast2go: ubiquitin-activating enzyme e1 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain