Sustainpine_db
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Assembly Name: biogeco3 v1.0

Name: double-strand break repair via homologous recombination

Term: GO:0000724  Help

Source: GO from Blast2go

Ontology: Biological Process


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog3_v1.0_unigene1419 biogeco3 v1.0 926
AutoFact: transducin/WD40 domain-containing protein [Arabidopsis thaliana] dbj|BAA77766.1| FAS2 [Arabidopsis thaliana] dbj|BAB11430.1| FAS2 [Arabidopsis thaliana] gb|AED97930.1| transducin/WD40 domain-containing protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: transducin wd40 domain-containing protein 0.0
C-terminus
biog3_v1.0_unigene8347 biogeco3 v1.0 322
AutoFact: Excision repair cross-complementing 1 ercc1, putative n=1 Tax=Ricinus communis RepID=B9RF25_RICCO 0.0
FL-Next: sp=DNA excision repair protein ERCC-1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: dna excision repair protein ercc-1 0.0
Internal
biog3_v1.0_unigene9067 biogeco3 v1.0 316
AutoFact: Structural maintenance of chromosomes 6 smc6, putative n=1 Tax=Ricinus communis RepID=B9R9U6_RICCO 0.0
FL-Next: tr=Structural maintenance of chromosomes 6 smc6, putative; Ricinus communis (Castor bean). 0.0
Blast2go: structural maintenance of chromosomes protein 6-like 0.0
Internal
biog3_v1.0_unigene10156 biogeco3 v1.0 451
AutoFact: transducin/WD40 domain-containing protein [Arabidopsis thaliana] dbj|BAA77766.1| FAS2 [Arabidopsis thaliana] dbj|BAB11430.1| FAS2 [Arabidopsis thaliana] gb|AED97930.1| transducin/WD40 domain-containing protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: transducin wd40 domain-containing protein 0.0
Internal
biog3_v1.0_unigene16346 biogeco3 v1.0 169
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: zinc finger swim domain-containing protein 0.0
C-terminus
biog3_v1.0_unigene17326 biogeco3 v1.0 249
AutoFact: ultraviolet hypersensitive 1 [Arabidopsis thaliana] 3.0e-10
FL-Next: Isoform 2 of DNA repair endonuclease UVH1 OS=Arabidopsis thaliana GN=UVH1 0.0
Blast2go: dna repair endonuclease uvh1 8.38969e-13
Internal
biog3_v1.0_unigene17582 biogeco3 v1.0 251
AutoFact: SMC-like protein [Arabidopsis thaliana] gb|AAD54770.1|AF120933_1 SMC-like protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Structural maintenance of chromosomes 6 smc6, putative; Ricinus communis (Castor bean). 0.0
Blast2go: structural maintenance of chromosomes protein 6-like 0.0
C-terminus
biog3_v1.0_unigene18618 biogeco3 v1.0 144
AutoFact: 5' repair endonuclease [Arabidopsis thaliana] 1.0e-08
FL-Next: Isoform 3 of DNA repair endonuclease UVH1 OS=Arabidopsis thaliana GN=UVH1 0.0
Blast2go: dna repair endonuclease uvh1 6.27712e-13
Internal
biog3_v1.0_unigene19073 biogeco3 v1.0 214
AutoFact: 5' repair endonuclease [Arabidopsis thaliana] 3.00004e-41
FL-Next: sp=DNA repair endonuclease UVH1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: dna repair endonuclease uvh1 0.0
Internal
biog3_v1.0_unigene20653 biogeco3 v1.0 376
AutoFact: DNA Helicase [Arabidopsis thaliana] 8.0e-14
FL-Next: sp=ATP-dependent DNA helicase Q-like 4A; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: dna helicase 8.68112e-18
Internal
biog3_v1.0_unigene20722 biogeco3 v1.0 401
AutoFact: protein MIM [Arabidopsis thaliana] dbj|BAB10445.1| SMC-like protein [Arabidopsis thaliana] gb|AED97471.1| protein MIM [Arabidopsis thaliana] 1.0e-34
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: structural maintenance of chromosomes protein 6-like 0.0
Internal
biog3_v1.0_unigene20888 biogeco3 v1.0 334
AutoFact: Chromatin remodeling complex subunit (Fragment) n=1 Tax=Populus trichocarpa RepID=B9MYK9_POPTR 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: swi snf-related matrix-associated actin-dependent regulator of chromatin subfamily a member 3-like 2-like 0.0
Internal
biog3_v1.0_unigene23228 biogeco3 v1.0 261
AutoFact: SMC-like protein [Arabidopsis thaliana] gb|AAD54770.1|AF120933_1 SMC-like protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: structural maintenance of chromosomes protein 6-like 0.0
Putative C-terminus
biog3_v1.0_unigene24049 biogeco3 v1.0 222
AutoFact: DNA repair protein radA (radA)-like [Oryza sativa Japonica Group] dbj|BAD45123.1| DNA repair protein radA (radA)-like [Oryza sativa Japonica Group] dbj|BAG91035.1| unnamed protein product [Oryza sativa Japonica Group] 3.0e-10
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dna repair protein rad51-like protein 4.00921e-34
Internal
biog3_v1.0_unigene24528 biogeco3 v1.0 157
AutoFact: Chromatin remodeling complex subunit (Fragment) n=1 Tax=Populus trichocarpa RepID=B9MYK9_POPTR 0.0
Blast2go: swi snf-related matrix-associated actin-dependent regulator of chromatin subfamily a member 3-like 2-like 0.0
unknown

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain