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Assembly Name: biogeco3 v1.0

Name: structural molecule activity

Term: GO:0005198  Help

Source: GO from Blast2go

Ontology: Molecular Function


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog3_v1.0_unigene62 biogeco3 v1.0 332
AutoFact: Tubulin beta-4 chain n=11 Tax=Eukaryota RepID=TBB4_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: beta chain 0.0
Internal
biog3_v1.0_unigene267 biogeco3 v1.0 278
AutoFact: Pkinase domain containing protein 5.0e-07
FL-Next: tr=Putative uncharacterized protein; Oryza sativa subsp. indica (Rice). 0.0
Blast2go: obp3-responsive protein 1 0.0
Putative N-terminus
biog3_v1.0_unigene1112 biogeco3 v1.0 1232
AutoFact: vesicle-associated membrane protein-associated protein [Triticum aestivum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: vesicle-associated membrane 0.0
Complete
biog3_v1.0_unigene1183 biogeco3 v1.0 740
AutoFact: Tubulin beta-4 chain n=11 Tax=Eukaryota RepID=TBB4_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: beta chain 0.0
Internal
biog3_v1.0_unigene1292 biogeco3 v1.0 641
AutoFact: coatomer subunit beta-1 [Arabidopsis thaliana] ref|NP_001190880.1| coatomer subunit beta-1 [Arabidopsis thaliana] sp|Q9SV21.2|COPB1_ARATH RecName: Full=Coatomer subunit beta-1; AltName: Full=Beta-coat protein 1; Short=Beta-COP 1 gb|AEE85918.1| coatomer su 0.0
FL-Next: sp=Coatomer subunit beta; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: coatomer subunit beta-1 0.0
Internal
biog3_v1.0_unigene1570 biogeco3 v1.0 1194
AutoFact: PAP_fibrillin domain containing protein 6.0e-16
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: plastid-lipid-associated protein 8 0.0
Complete
biog3_v1.0_unigene2370 biogeco3 v1.0 851
AutoFact: FtsZ1 n=1 Tax=Marchantia polymorpha RepID=Q84K12_MARPO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: cell division protein ftsz homolog chloroplastic-like 0.0
C-terminus
biog3_v1.0_unigene2559 biogeco3 v1.0 870
AutoFact: SYS1 domain containing protein 1.0e-30
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: coatomer subunit beta -1 0.0
Putative Complete
biog3_v1.0_unigene2911 biogeco3 v1.0 468
AutoFact: Cell division protein ftsZ, putative n=1 Tax=Ricinus communis RepID=B9SRX2_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: plastid division protein 0.0
Internal
biog3_v1.0_unigene3161 biogeco3 v1.0 730
AutoFact: Vesicle-associated protein 4-2 n=3 Tax=Arabidopsis RepID=VAP42_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: vesicle-associated protein 4-2-like 0.0
C-terminus
biog3_v1.0_unigene3841 biogeco3 v1.0 257
AutoFact: harpin binding protein 1 [Vitis sp. NL-2003] 3.0e-12
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: harpin binding protein 1 1.6323e-17
Internal
biog3_v1.0_unigene4582 biogeco3 v1.0 473
AutoFact: Iron-sulfur assembly protein IscA, chloroplastic n=3 Tax=Arabidopsis RepID=ISCAP_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: iron-sulfur assembly protein 0.0
N-terminus
biog3_v1.0_unigene4889 biogeco3 v1.0 1658
AutoFact: Iron-sulfur cluster assembly protein n=1 Tax=Chlamydomonas reinhardtii RepID=A8IR30_CHLRE 0.0
FL-Next: sp=NifU-like protein 1, chloroplastic; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: at4g01940 t7b11_20 0.0
Complete
biog3_v1.0_unigene4956 biogeco3 v1.0 396
AutoFact: FtsZ-like protein n=2 Tax=Nicotiana tabacum RepID=Q95DV5_TOBAC 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: plastid division protein 0.0
Putative C-terminus
biog3_v1.0_unigene6061 biogeco3 v1.0 2658
AutoFact: Coatomer subunit gamma (Fragment) n=4 Tax=rosids RepID=D7TQ06_VITVI 0.0
FL-Next: sp=Coatomer subunit gamma-2; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: coatomer subunit gamma 0.0
C-terminus
biog3_v1.0_unigene6294 biogeco3 v1.0 388
AutoFact: Tubulin gamma-1 chain n=30 Tax=Embryophyta RepID=TBG1_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: gamma tubulin 0.0
Internal
biog3_v1.0_unigene6316 biogeco3 v1.0 395
AutoFact: Vesicle-associated protein 4-2 n=3 Tax=Arabidopsis RepID=VAP42_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: vesicle-associated protein 4-2-like 0.0
Putative N-terminus
biog3_v1.0_unigene7148 biogeco3 v1.0 1027
AutoFact: Major sperm protein [Medicago truncatula] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
N-terminus
biog3_v1.0_unigene7295 biogeco3 v1.0 521
AutoFact: Coatomer alpha subunit n=1 Tax=Hordeum vulgare subsp. vulgare RepID=Q6RYF4_HORVD 0.0
FL-Next: sp=Coatomer subunit alpha-2; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: coatomer alpha 0.0
C-terminus
biog3_v1.0_unigene10325 biogeco3 v1.0 606
AutoFact: FtsZ1 n=1 Tax=Marchantia polymorpha RepID=Q84K12_MARPO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: cell division protein ftsz homolog chloroplastic-like 0.0
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain