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Assembly Name: biogeco3 v1.0

Name: structural molecule activity

Term: GO:0005198  Help

Source: GO from Blast2go

Ontology: Molecular Function

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
biog3_v1.0_unigene10431 biogeco3 v1.0 370
• AutoFact: Harpin binding protein 1 n=2 Tax=Glycine max RepID=Q5QJB6_SOYBN 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: harpin binding protein 1 0.0
Internal
biog3_v1.0_unigene10539 biogeco3 v1.0 885
• AutoFact: FtsZ-like protein n=2 Tax=Nicotiana tabacum RepID=Q95DV5_TOBAC 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: plastid division protein 0.0
Internal
biog3_v1.0_unigene10674 biogeco3 v1.0 1307
• AutoFact: Cell division protein ftsZ, putative n=1 Tax=Ricinus communis RepID=B9SRX2_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: plastid division protein 0.0
C-terminus
biog3_v1.0_unigene10683 biogeco3 v1.0 760
• AutoFact: membrane-associated mannitol-induced protein [Arabidopsis thaliana] sp|Q1ECE0.1|VAP41_ARATH RecName: Full=Vesicle-associated protein 4-1; AltName: Full=Plant VAP homolog 4-1; Short=AtPVA41; AltName: Full=Protein MEMBRANE-ASSOCIATED MANNITOL-INDUCED; Short 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: vesicle-associated protein 4-2-like 0.0
Complete
biog3_v1.0_unigene10840 biogeco3 v1.0 1417
• AutoFact: actin related protein 2/3 complex, subunit 2 [Arabidopsis thaliana] gb|AAM60850.1| unknown [Arabidopsis thaliana] dbj|BAC43079.1| unknown protein [Arabidopsis thaliana] gb|AAO63372.1| At1g30825 [Arabidopsis thaliana] gb|AEE31281.1| actin related protein 2 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: actin related protein 2 3 subunit 2 0.0
Putative Complete
biog3_v1.0_unigene11784 biogeco3 v1.0 1301
• AutoFact: Tubulin alpha-2/alpha-4 chain n=384 Tax=Eukaryota RepID=TBA2_ARATH 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: alpha tubulin 1 0.0
C-terminus
biog3_v1.0_unigene12274 biogeco3 v1.0 1447
• AutoFact: Tubulin beta-4 chain n=11 Tax=Eukaryota RepID=TBB4_ORYSJ 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: tubulin beta 0.0
C-terminus
biog3_v1.0_unigene13740 biogeco3 v1.0 363
• AutoFact: Plastid lipid-associated protein 3, chloroplast, putative n=1 Tax=Ricinus communis RepID=B9RZ06_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: plastid lipid-associated protein chloroplast 0.0
Internal
biog3_v1.0_unigene14794 biogeco3 v1.0 488
• AutoFact: Plastid lipid-associated protein 3, chloroplast, putative n=1 Tax=Ricinus communis RepID=B9RZ06_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: plastid lipid-associated protein chloroplast 0.0
Internal
biog3_v1.0_unigene15022 biogeco3 v1.0 370
• AutoFact: Tubulin beta-4 chain n=11 Tax=Eukaryota RepID=TBB4_ORYSJ 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: beta chain 0.0
N-terminus
biog3_v1.0_unigene15862 biogeco3 v1.0 145
• AutoFact: Iron-sulfur assembly protein IscA, chloroplastic n=3 Tax=Arabidopsis RepID=ISCAP_ARATH 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: iron-sulfur assembly protein 0.0
C-terminus
biog3_v1.0_unigene17102 biogeco3 v1.0 127
• AutoFact: Major sperm protein [Medicago truncatula] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
C-terminus
biog3_v1.0_unigene19287 biogeco3 v1.0 167
• AutoFact: Plastid-lipid-Associated Protein (Fragment) n=1 Tax=Nicotiana tabacum RepID=O24141_TOBAC 0.0
• Blast2go: plastid-lipid-associated protein 0.0
unknown
biog3_v1.0_unigene19478 biogeco3 v1.0 255
• AutoFact: membrane-associated mannitol-induced protein [Arabidopsis thaliana] sp|Q1ECE0.1|VAP41_ARATH RecName: Full=Vesicle-associated protein 4-1; AltName: Full=Plant VAP homolog 4-1; Short=AtPVA41; AltName: Full=Protein MEMBRANE-ASSOCIATED MANNITOL-INDUCED; Short 0.0
• Blast2go: vesicle-associated protein 4-2-like 0.0
unknown
biog3_v1.0_unigene20123 biogeco3 v1.0 223
• AutoFact: Coatomer alpha subunit n=1 Tax=Hordeum vulgare subsp. vulgare RepID=Q6RYF4_HORVD 0.0
• Blast2go: coatomer alpha 0.0
Putative coding
biog3_v1.0_unigene20368 biogeco3 v1.0 170
• AutoFact: Harpin binding protein 1 n=2 Tax=Glycine max RepID=Q5QJB6_SOYBN 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: harpin binding protein 1 0.0
C-terminus
biog3_v1.0_unigene21691 biogeco3 v1.0 1328
• AutoFact: vesicle-associated membrane protein-associated protein [Triticum aestivum] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: vesicle-associated membrane 0.0
Putative Complete
biog3_v1.0_unigene21910 biogeco3 v1.0 237
• AutoFact: Plastid lipid-associated protein 3, chloroplast, putative n=1 Tax=Ricinus communis RepID=B9RZ06_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: plastid lipid-associated protein chloroplast 0.0
Internal
biog3_v1.0_unigene23183 biogeco3 v1.0 250
• AutoFact: Plastid-lipid-Associated Protein (Fragment) n=1 Tax=Nicotiana tabacum RepID=O24141_TOBAC 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: plastid-lipid-associated protein 0.0
Putative C-terminus
biog3_v1.0_unigene23196 biogeco3 v1.0 257
• AutoFact: coatomer subunit beta-1 [Arabidopsis thaliana] ref|NP_001190880.1| coatomer subunit beta-1 [Arabidopsis thaliana] sp|Q9SV21.2|COPB1_ARATH RecName: Full=Coatomer subunit beta-1; AltName: Full=Beta-coat protein 1; Short=Beta-COP 1 gb|AEE85918.1| coatomer su 0.0
• FL-Next: sp=Coatomer subunit beta; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: coatomer subunit beta-1 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain