Sustainpine_db
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Assembly Name: biogeco3 v1.0

Name: nucleolus

Term: GO:0005730  Help

Source: GO from Blast2go

Ontology: Cellular Component


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog3_v1.0_unigene10308 biogeco3 v1.0 374
AutoFact: Arsenite-resistance protein, putative n=1 Tax=Ricinus communis RepID=B9S6M6_RICCO 0.0
Blast2go: serrate rna effector molecule-like 0.0
Putative coding
biog3_v1.0_unigene10333 biogeco3 v1.0 524
AutoFact: WD40 domain-containing protein [Arabidopsis thaliana] gb|AAU94425.1| At1g65030 [Arabidopsis thaliana] gb|AEE34317.1| WD40 domain-containing protein [Arabidopsis thaliana] 0.0
Blast2go: p21-activated protein kinase-interacting protein 1-like 0.0
unknown
biog3_v1.0_unigene10497 biogeco3 v1.0 1894
AutoFact: Mitochondrial processing peptidase beta subunit n=1 Tax=Cucumis melo RepID=Q9AXQ2_CUCME 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: mitochondrial processing peptidase 0.0
Complete
biog3_v1.0_unigene10580 biogeco3 v1.0 989
AutoFact: CCAAT/enhancer binding protein zeta [Bos taurus] 0.0
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: ccaat enhancer-binding protein zeta-like 0.0
Internal
biog3_v1.0_unigene10686 biogeco3 v1.0 961
AutoFact: end binding protein 1C [Arabidopsis thaliana] dbj|BAB09646.1| unnamed protein product [Arabidopsis thaliana] gb|AAM65311.1| microtubule-associated protein EB1-like protein [Arabidopsis thaliana] dbj|BAD43258.1| unknown protein [Arabidopsis thaliana] gb|AB 1.0e-18
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
C-terminus
biog3_v1.0_unigene10823 biogeco3 v1.0 711
AutoFact: P18 n=1 Tax=Solanum chacoense RepID=Q6V9I5_SOLCH 4.06377e-44
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone deacetylase complex subunit sap18 0.0
Complete
biog3_v1.0_unigene10889 biogeco3 v1.0 1498
AutoFact: pantothenate kinase 2 (Hallervorden-Spatz syndrome) [Rattus norvegicus] gb|EDL80236.1| pantothenate kinase 2 (Hallervorden-Spatz syndrome) (predicted), isoform CRA_a [Rattus norvegicus] 5.04467e-44
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pantothenate kinase 1 0.0
Putative N-terminus
biog3_v1.0_unigene10934 biogeco3 v1.0 609
AutoFact: S-adenosyl-L-methionine-dependent methyltransferase-like protein [Arabidopsis thaliana] dbj|BAA96951.1| protein carboxyl methylase-like [Arabidopsis thaliana] gb|AAL38734.1| putative protein carboxyl methylase [Arabidopsis thaliana] gb|AAM20006.1| putativ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Putative N-terminus
biog3_v1.0_unigene11043 biogeco3 v1.0 590
AutoFact: RNA recognition motif-containing protein [Arabidopsis thaliana] ref|NP_974317.1| RNA recognition motif-containing protein [Arabidopsis thaliana] dbj|BAA97064.1| unnamed protein product [Arabidopsis thaliana] gb|AAL36202.1| putative RNA-binding protein [Ar 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rna recognition motif-containing protein 0.0
C-terminus
biog3_v1.0_unigene11264 biogeco3 v1.0 952
AutoFact: Pre-mRNA-splicing factor SPF27-like protein [Arabidopsis thaliana] sp|Q949S9.1|SPF27_ARATH RecName: Full=Pre-mRNA-splicing factor SPF27 homolog; AltName: Full=Modifier of SNC1 member 4; AltName: Full=Protein BCAS2 homolog gb|AAK93587.1| unknown protein [A 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: pre-mrna-splicing factor spf27-like protein 0.0
Complete
biog3_v1.0_unigene11270 biogeco3 v1.0 845
AutoFact: N-acetyl-gamma-glutamyl-phosphate reductase n=1 Tax=Picea sitchensis RepID=A9NUH1_PICSI 0.0
FL-Next: sp=N-acetyl-gamma-glutamyl-phosphate reductase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: n-acetyl-gamma-glutamyl-phosphate reductase 0.0
Internal
biog3_v1.0_unigene11312 biogeco3 v1.0 738
AutoFact: Putative glycine-rich protein n=1 Tax=Picea glauca RepID=Q3HRT2_PICGL 2.0e-40
FL-Next: tr=Putative glycine-rich protein; Picea glauca (White spruce) (Pinus glauca). 0.0
Blast2go: protein 0.0
C-terminus
biog3_v1.0_unigene11436 biogeco3 v1.0 1346
AutoFact: 40S ribosomal protein S3a-2 [Arabidopsis thaliana] sp|Q42262.3|RS3A2_ARATH RecName: Full=40S ribosomal protein S3a-2 emb|CAA04689.1| Putative S-phase-specific ribosomal protein [Arabidopsis thaliana] emb|CAA18846.1| Putative S-phase-specific ribosomal pro 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 40s ribosomal protein 0.0
Complete
biog3_v1.0_unigene11460 biogeco3 v1.0 1017
AutoFact: 60S ribosomal protein L11-1 n=51 Tax=Embryophyta RepID=RL111_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 60s ribosomal protein l11 0.0
Complete
biog3_v1.0_unigene11471 biogeco3 v1.0 1630
AutoFact: RNA-binding protein AKIP1-like [Solanum tuberosum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rna recognition motif-containing protein 0.0
Complete
biog3_v1.0_unigene11515 biogeco3 v1.0 1119
AutoFact: 40S ribosomal protein S6 n=7 Tax=Spermatophyta RepID=RS6_ASPOF 0.0
FL-Next: sp=40S ribosomal protein S6; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Complete
biog3_v1.0_unigene11531 biogeco3 v1.0 832
AutoFact: ribosomal protein L32 [Medicago sativa] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 60s ribosomal protein 0.0
Complete
biog3_v1.0_unigene11538 biogeco3 v1.0 2984
AutoFact: Elongation factor 2 n=32 Tax=Magnoliophyta RepID=EF2_BETVU 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: elongation factor ef-2 0.0
Complete
biog3_v1.0_unigene11568 biogeco3 v1.0 821
AutoFact: Histone H2AX n=7 Tax=Spermatophyta RepID=H2AX_PICAB 0.0
FL-Next: sp=Histone H2A; Pinus pinaster (Maritime pine). 0.0
Blast2go: histone h2a 0.0
Complete
biog3_v1.0_unigene11606 biogeco3 v1.0 1157
AutoFact: 60S ribosomal protein L4 n=1 Tax=Prunus armeniaca RepID=RL4_PRUAR 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 60s ribosomal protein l4-1 0.0
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain