|
Sequence
|
Assembly
|
Length (nt)
|
|
Full-Length
|
|
biog3_v1.0_unigene8574
|
biogeco3 v1.0
|
359
|
|
• AutoFact: Herpes_gp2 multi-domain protein
|
2.0e-06
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: protein
|
0.0
|
|
Internal
|
|
biog3_v1.0_unigene8575
|
biogeco3 v1.0
|
1504
|
|
• AutoFact: TCP-1/cpn60 chaperonin family protein [Arabidopsis thaliana] dbj|BAB01754.1| GloEL protein; chaperonin, 60 kDa [Arabidopsis thaliana] gb|AEE75362.1| TCP-1/cpn60 chaperonin family protein [Arabidopsis thaliana]
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: isco large subunit-binding protein subunit beta
|
0.0
|
|
N-terminus
|
|
biog3_v1.0_unigene8694
|
biogeco3 v1.0
|
333
|
|
• AutoFact: transducin/WD40 domain-containing protein [Arabidopsis thaliana] emb|CAC01754.1| putative protein [Arabidopsis thaliana] gb|AAL36367.1| unknown protein [Arabidopsis thaliana] gb|AAM14196.1| unknown protein [Arabidopsis thaliana] gb|AED92176.1| transducin/
|
0.0
|
|
• FL-Next: sp=Ribosome biogenesis protein WDR12 homolog; Chlamydomonas reinhardtii (Chlamydomonas smithii).
|
0.0
|
|
• Blast2go: ribosome biogenesis protein wdr12 homolog
|
0.0
|
|
N-terminus
|
|
biog3_v1.0_unigene8695
|
biogeco3 v1.0
|
359
|
|
• AutoFact: Interferon-induced guanylate-binding protein, putative n=1 Tax=Ricinus communis RepID=B9RB86_RICCO
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: protein
|
0.0
|
|
Internal
|
|
biog3_v1.0_unigene8750
|
biogeco3 v1.0
|
329
|
|
• AutoFact: transducin/WD40 domain-containing protein [Arabidopsis thaliana] emb|CAC01839.1| WD40-repeat protein [Arabidopsis thaliana] gb|AED92333.1| transducin/WD40 domain-containing protein [Arabidopsis thaliana]
|
0.0
|
|
• Blast2go: transducin beta-like protein 3-like
|
0.0
|
|
Coding
|
|
biog3_v1.0_unigene8962
|
biogeco3 v1.0
|
562
|
|
• AutoFact: large subunit ribosomal protein L24e [Arabidopsis thaliana] ref|NP_001078059.1| large subunit ribosomal protein L24e [Arabidopsis thaliana] sp|O22165.1|RLP24_ARATH RecName: Full=Probable ribosome biogenesis protein RLP24 gb|AAC31838.1| 60S ribosomal prote
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: large subunit ribosomal protein l24e
|
0.0
|
|
Putative Complete
|
|
biog3_v1.0_unigene9049
|
biogeco3 v1.0
|
741
|
|
• AutoFact: Protein phosphatase, putative n=1 Tax=Ricinus communis RepID=B9T8J0_RICCO
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: protein phosphatase 2c 57
|
0.0
|
|
N-terminus
|
|
biog3_v1.0_unigene9157
|
biogeco3 v1.0
|
328
|
|
• AutoFact: small nuclear ribonucleoprotein associated protein B [Arabidopsis thaliana] ref|NP_849414.1| small nuclear ribonucleoprotein associated protein B [Arabidopsis thaliana] ref|NP_001031682.1| small nuclear ribonucleoprotein associated protein B [Arabidopsis
|
3.0e-30
|
|
• FL-Next: tr=Predicted protein; subsp. trichocarpa).
|
0.0
|
|
• Blast2go: small nuclear ribonucleoprotein associated protein b
|
8.18162e-41
|
|
N-terminus
|
|
biog3_v1.0_unigene9290
|
biogeco3 v1.0
|
644
|
|
• AutoFact: pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [Arabidopsis thaliana] emb|CAB82945.1| ATP-dependent RNA helicase-like protein [Arabidopsis thaliana] gb|AAM53340.1| ATP-dependent RNA helicase-like protein [Arabidopsis thaliana] gb|AAQ56774
|
0.0
|
|
• FL-Next: sp=Probable pre-mRNA-splicing factor ATP-dependent RNA helicase; Arabidopsis thaliana (Mouse-ear cress).
|
0.0
|
|
• Blast2go: protein
|
0.0
|
|
Internal
|
|
biog3_v1.0_unigene9291
|
biogeco3 v1.0
|
255
|
|
• AutoFact: Histone H4 n=1 Tax=Ostreococcus tauri RepID=Q01FF9_OSTTA
|
5.0e-36
|
|
• Blast2go: histone h4
|
4.2039e-45
|
|
Putative coding
|
|
biog3_v1.0_unigene9369
|
biogeco3 v1.0
|
1256
|
|
• AutoFact: Ubiquitin carboxyl-terminal hydrolase (Fragment) n=1 Tax=Vitis vinifera RepID=D7SU81_VITVI
|
0.0
|
|
• FL-Next: sp=Ubiquitin carboxyl-terminal hydrolase 26; Oryza sativa subsp. japonica (Rice).
|
0.0
|
|
• Blast2go: ubiquitin carboxyl-terminal hydrolase 26-like
|
0.0
|
|
C-terminus
|
|
biog3_v1.0_unigene9469
|
biogeco3 v1.0
|
1798
|
|
• AutoFact: DNA helicase, TBP-interacting protein n=1 Tax=Physcomitrella patens subsp. patens RepID=A9TL22_PHYPA
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: dna tbp-interacting protein
|
0.0
|
|
Complete
|
|
biog3_v1.0_unigene9508
|
biogeco3 v1.0
|
898
|
|
• AutoFact: 60S ribosomal protein L21 n=9 Tax=Poaceae RepID=Q9AV87_ORYSJ
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: 60s ribosomal protein l21
|
0.0
|
|
Complete
|
|
biog3_v1.0_unigene9699
|
biogeco3 v1.0
|
925
|
|
• AutoFact: 40S ribosomal protein S19-1 [Arabidopsis thaliana] sp|Q9SGA6.1|RS191_ARATH RecName: Full=40S ribosomal protein S19-1 gb|AAF14828.1|AC011664_10 putative 40S ribosomal protein S19 [Arabidopsis thaliana] gb|AAK44092.1|AF370277_1 putative 40S ribosomal protei
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: 40s ribosomal protein s19
|
0.0
|
|
Complete
|
|
biog3_v1.0_unigene9875
|
biogeco3 v1.0
|
1365
|
|
• AutoFact: RNA helicase n=1 Tax=Vigna radiata var. radiata RepID=Q9M6R6_VIGRR
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: dead-box atp-dependent rna helicase 7-like
|
0.0
|
|
Internal
|
|
biog3_v1.0_unigene10023
|
biogeco3 v1.0
|
366
|
|
• AutoFact: ROOT HAIRLESS 1 [Arabidopsis thaliana]
|
0.0
|
|
• Blast2go: root hairless 1
|
0.0
|
|
Putative coding
|
|
biog3_v1.0_unigene10040
|
biogeco3 v1.0
|
481
|
|
• AutoFact: ribosomal protein L1p/L10e family protein [Arabidopsis thaliana] emb|CAB88283.1| putative protein [Arabidopsis thaliana] gb|AAL49900.1| unknown protein [Arabidopsis thaliana] gb|AEE79812.1| ribosomal protein L1p/L10e family protein [Arabidopsis thaliana]
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: protein
|
0.0
|
|
Internal
|
|
biog3_v1.0_unigene10071
|
biogeco3 v1.0
|
519
|
|
• AutoFact: Unassigned protein
|
|
|
• FL-Next: sp=Pumilio homolog 24; Arabidopsis thaliana (Mouse-ear cress).
|
0.0
|
|
• Blast2go: protein
|
0.0
|
|
Internal
|
|
biog3_v1.0_unigene10152
|
biogeco3 v1.0
|
534
|
|
• AutoFact: RNA polymerase, dimerisation [Medicago truncatula]
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: dna-directed rna polymerase third largest subunit
|
0.0
|
|
Internal
|
|
biog3_v1.0_unigene10195
|
biogeco3 v1.0
|
1739
|
|
• AutoFact: Mitochondrial processing peptidase beta subunit n=1 Tax=Cucumis melo RepID=Q9AXQ2_CUCME
|
0.0
|
|
• FL-Next: sp=Probable mitochondrial-processing peptidase subunit beta; Arabidopsis thaliana (Mouse-ear cress).
|
0.0
|
|
• Blast2go: mitochondrial processing peptidase
|
0.0
|
|
Complete
|
