|
Sequence
|
Assembly
|
Length (nt)
|
|
Full-Length
|
|
biog3_v1.0_unigene3022
|
biogeco3 v1.0
|
304
|
|
• AutoFact: U5 small nuclear ribonucleoprotein component [Arabidopsis thaliana] ref|NP_849600.1| U5 small nuclear ribonucleoprotein component [Arabidopsis thaliana] gb|AAF80219.1|AC025290_8 Contains similarity to an U5 snRNP-specific protein 116 kD from Homo sapiens
|
0.0
|
|
• Blast2go: u5 small nuclear ribonucleoprotein component
|
0.0
|
|
unknown
|
|
biog3_v1.0_unigene3095
|
biogeco3 v1.0
|
1699
|
|
• AutoFact: oligosaccharyltransferase complex subunit beta [Arabidopsis thaliana] gb|AAL16268.1|AF428338_1 AT5g66680/MSN2_7 [Arabidopsis thaliana] gb|AAN12926.1| putative dolichyl-di-phosphooligosaccharide glycotransferase (oligosaccharyltransferase) [Arabidopsis tha
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kda subunit
|
0.0
|
|
Complete
|
|
biog3_v1.0_unigene3192
|
biogeco3 v1.0
|
317
|
|
• AutoFact: F1F0-ATPase inhibitor protein [Arabidopsis thaliana]
|
2.0e-08
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: f1f0-atpase inhibitor protein
|
1.83481e-39
|
|
C-terminus
|
|
biog3_v1.0_unigene3213
|
biogeco3 v1.0
|
818
|
|
• AutoFact: putative arginine/serine-rich protein [Arabidopsis thaliana]
|
9.99967e-42
|
|
• Blast2go: protein arginine serine-rich 45
|
0.0
|
|
Coding
|
|
biog3_v1.0_unigene3285
|
biogeco3 v1.0
|
425
|
|
• AutoFact: 40S ribosomal S4 protein [Glycine max] gb|ACU21252.1| unknown [Glycine max]
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: 40s ribosomal protein s4
|
0.0
|
|
C-terminus
|
|
biog3_v1.0_unigene3353
|
biogeco3 v1.0
|
459
|
|
• AutoFact: transducin family protein / WD-40 repeat family protein [Arabidopsis thaliana] gb|AAC63653.1| unknown protein [Arabidopsis thaliana] gb|AAM15129.1| unknown protein [Arabidopsis thaliana] gb|AEC10921.1| transducin family protein / WD-40 repeat family prote
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: u3 small nucleolar rna-associated protein
|
0.0
|
|
Putative N-terminus
|
|
biog3_v1.0_unigene3488
|
biogeco3 v1.0
|
1945
|
|
• AutoFact: DEAD BOX RNA helicase RH15-like protein [Arabidopsis thaliana]
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: protein
|
0.0
|
|
Complete
|
|
biog3_v1.0_unigene3519
|
biogeco3 v1.0
|
466
|
|
• AutoFact: end binding protein 1C [Arabidopsis thaliana] dbj|BAB09646.1| unnamed protein product [Arabidopsis thaliana] gb|AAM65311.1| microtubule-associated protein EB1-like protein [Arabidopsis thaliana] dbj|BAD43258.1| unknown protein [Arabidopsis thaliana] gb|AB
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: microtubule-associated protein rp eb family member 1-like
|
0.0
|
|
Putative C-terminus
|
|
biog3_v1.0_unigene3522
|
biogeco3 v1.0
|
815
|
|
• AutoFact: PREDICTED: similar to Late histone H2A.2.2 n=2 Tax=Hydra magnipapillata RepID=UPI0001924B8D
|
3.0e-38
|
|
• FL-Next: sp=Histone H4; Picea abies (Norway spruce) (Picea excelsa).
|
0.0
|
|
• Blast2go: histone h4
|
0.0
|
|
Complete
|
|
biog3_v1.0_unigene3623
|
biogeco3 v1.0
|
487
|
|
• AutoFact: SRP40_C multi-domain protein
|
7.0e-31
|
|
• Blast2go: nucleolar and coiled-body phosphoprotein
|
6.09565e-43
|
|
Coding
|
|
biog3_v1.0_unigene3874
|
biogeco3 v1.0
|
2463
|
|
• AutoFact: enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase [Arabidopsis thaliana] sp|Q9ZPI5.1|MFP2_ARATH RecName: Full=Peroxisomal fatty acid beta-oxidation multifunctional protein MFP2; Short=AtMPF2; Includes: RecName: Full=Enoyl-CoA hydratase/3-2-trans-enoyl-C
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: glyoxysomal fatty acid beta-oxidation multifunctional protein mfp-a
|
0.0
|
|
C-terminus
|
|
biog3_v1.0_unigene3916
|
biogeco3 v1.0
|
686
|
|
• AutoFact: mitochondrial prohibitin 1 [Petunia x hybrida]
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: protein
|
0.0
|
|
C-terminus
|
|
biog3_v1.0_unigene3944
|
biogeco3 v1.0
|
429
|
|
• AutoFact: uncharacterized protein [Arabidopsis thaliana] gb|AAF27096.1|AC011809_5 Unknown protein [Arabidopsis thaliana] gb|AAL07061.1| unknown protein [Arabidopsis thaliana] gb|AAM20279.1| unknown protein [Arabidopsis thaliana] gb|AEE29771.1| uncharacterized prote
|
2.99878e-43
|
|
• Blast2go: uncharacterized protein
|
0.0
|
|
Coding
|
|
biog3_v1.0_unigene4004
|
biogeco3 v1.0
|
1987
|
|
• AutoFact: Pre-mRNA-processing factor 19 [Arabidopsis thaliana] sp|Q94BR4.1|PR19A_ARATH RecName: Full=Pre-mRNA-processing factor 19 homolog 1; AltName: Full=MOS4-associated complex protein 3A; Short=MAC protein 3A; AltName: Full=Plant U-box protein 59; AltName: Full
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: ubiquitin-protein pub59
|
0.0
|
|
Complete
|
|
biog3_v1.0_unigene4094
|
biogeco3 v1.0
|
540
|
|
• AutoFact: RNA polymerase I subunit 43 [Arabidopsis thaliana] gb|AAK62414.1|AF386969_1 RNA polymerase subunit (isoform B) [Arabidopsis thaliana] gb|AAB00529.1| RNA polymerase subunit [Arabidopsis thaliana] gb|AAB71974.1| RNA polymerase subunit (isoform B) [Arabidops
|
0.0
|
|
• FL-Next: tr=DNA-directed RNA polymerase I/III subunits, putative; Ricinus communis (Castor bean).
|
0.0
|
|
• Blast2go: rna polymerase subunit
|
0.0
|
|
C-terminus
|
|
biog3_v1.0_unigene4097
|
biogeco3 v1.0
|
967
|
|
• AutoFact: Mitochondrial F0 ATP synthase D chain n=1 Tax=Elaeis guineensis RepID=B3TLP5_ELAGV
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: atp synthase d mitochondrial
|
0.0
|
|
Complete
|
|
biog3_v1.0_unigene4136
|
biogeco3 v1.0
|
1800
|
|
• AutoFact: Serine/threonine-protein phosphatase PP2A-3 catalytic subunit n=15 Tax=Embryophyta RepID=PP2A3_ARATH
|
0.0
|
|
• FL-Next: sp=Serine/threonine-protein phosphatase; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: pp2ac-2 - phosphatase 2a isoform 2 belonging to family 2
|
0.0
|
|
Complete
|
|
biog3_v1.0_unigene4186
|
biogeco3 v1.0
|
530
|
|
• AutoFact: U5 small nuclear ribonucleoprotein component [Arabidopsis thaliana] ref|NP_849600.1| U5 small nuclear ribonucleoprotein component [Arabidopsis thaliana] gb|AAF80219.1|AC025290_8 Contains similarity to an U5 snRNP-specific protein 116 kD from Homo sapiens
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape).
|
0.0
|
|
• Blast2go: u5 small nuclear ribonucleoprotein component
|
0.0
|
|
N-terminus
|
|
biog3_v1.0_unigene4228
|
biogeco3 v1.0
|
209
|
|
• AutoFact: transducin/WD40 domain-containing protein [Arabidopsis thaliana] emb|CAC01839.1| WD40-repeat protein [Arabidopsis thaliana] gb|AED92333.1| transducin/WD40 domain-containing protein [Arabidopsis thaliana]
|
0.0
|
|
• Blast2go: transducin beta-like protein 3-like
|
0.0
|
|
unknown
|
|
biog3_v1.0_unigene4344
|
biogeco3 v1.0
|
1787
|
|
• AutoFact: pfam04427, Brix, Brix domain
|
1.0e-34
|
|
• FL-Next: sp=Ribosome production factor 2 homolog; Oryza sativa subsp. japonica (Rice).
|
0.0
|
|
• Blast2go: ribosome production factor 2 homolog
|
0.0
|
|
Complete
|
