Sustainpine_db
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Assembly Name: biogeco3 v1.0

Name: nucleolus

Term: GO:0005730  Help

Source: GO from Blast2go

Ontology: Cellular Component

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
biog3_v1.0_unigene25159 biogeco3 v1.0 284
• AutoFact: nucleoporin 155 [Arabidopsis thaliana] gb|AEE29235.1| nucleoporin 155 [Arabidopsis thaliana] 0.0
• Blast2go: at1g14850-like protein 0.0
unknown
biog3_v1.0_unigene25226 biogeco3 v1.0 247
• AutoFact: Ubiquitin-60S ribosomal protein L40-1 n=69 Tax=Eukaryota RepID=RL40A_ARATH 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: ubiquitin a-52 residue ribosomal protein fusion product 1 0.0
C-terminus
biog3_v1.0_unigene25524 biogeco3 v1.0 187
• AutoFact: putative ATP/GTP binding protein [Ananas comosus] 0.0
• Blast2go: atp gtp binding protein 0.0
unknown
biog3_v1.0_unigene25663 biogeco3 v1.0 1233
• AutoFact: Eukaryotic translation initiation factor 6-2 n=8 Tax=Magnoliophyta RepID=IF62_ARATH 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: eukaryotic translation initiation factor 6 0.0
Complete
biog3_v1.0_unigene25679 biogeco3 v1.0 1586
• AutoFact: S-adenosylmethionine synthase 3 n=6 Tax=Embryophyta RepID=METK3_ARATH 0.0
• FL-Next: sp=S-adenosylmethionine synthase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: s-adenosylmethionine synthetase 0.0
Complete
biog3_v1.0_unigene25712 biogeco3 v1.0 545
• AutoFact: Mitochondrial F0 ATP synthase D chain n=1 Tax=Elaeis guineensis RepID=B3TLP5_ELAGV 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: atp synthase d mitochondrial 0.0
Complete
biog3_v1.0_unigene25733 biogeco3 v1.0 433
• AutoFact: Histone H2A n=1 Tax=Populus trichocarpa RepID=B9I7E7_POPTR 2.0e-35
• FL-Next: sp=Histone H2A; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: histone h2a-like protein 0.0
N-terminus
biog3_v1.0_unigene25801 biogeco3 v1.0 374
• AutoFact: DNA helicase, TBP-interacting protein n=1 Tax=Physcomitrella patens subsp. patens RepID=A9TL22_PHYPA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: dna tbp-interacting protein 0.0
Putative C-terminus
biog3_v1.0_unigene25936 biogeco3 v1.0 366
• AutoFact: ribosomal protein L7Ae-like [Brassica rapa] 0.0
• Blast2go: protein 0.0
unknown
biog3_v1.0_unigene26127 biogeco3 v1.0 203
• AutoFact: Ubiquitin-60S ribosomal protein L40-1 n=69 Tax=Eukaryota RepID=RL40A_ARATH 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: ubiquitin a-52 residue ribosomal protein fusion product 1 0.0
N-terminus
biog3_v1.0_unigene26160 biogeco3 v1.0 263
• AutoFact: 3-ketoacyl-CoA thiolase 2 [Arabidopsis thaliana] sp|Q56WD9.2|THIK2_ARATH RecName: Full=3-ketoacyl-CoA thiolase 2, peroxisomal; AltName: Full=Acetyl-CoA acyltransferase 2; AltName: Full=Beta-ketothiolase 2; AltName: Full=Peroxisomal 3-oxoacyl-CoA thiolase 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: 3-ketoacyl- thiolase 0.0
Internal
biog3_v1.0_unigene26192 biogeco3 v1.0 275
• AutoFact: Serine/threonine protein kinase, putative n=1 Tax=Ricinus communis RepID=B9SWQ3_RICCO 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein kinase 0.0
Internal
biog3_v1.0_unigene26206 biogeco3 v1.0 283
• AutoFact: Rac-like GTP-binding protein RAC2 n=5 Tax=rosids RepID=RAC2_LOTJA 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: rop-family small gtpase 0.0
N-terminus
biog3_v1.0_unigene26210 biogeco3 v1.0 368
• AutoFact: histone H4 [Hyacinthus orientalis] 6.0e-38
• FL-Next: sp=Histone H4; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: histone h4 0.0
Complete
biog3_v1.0_unigene26228 biogeco3 v1.0 302
• AutoFact: U5 small nuclear ribonucleoprotein component [Arabidopsis thaliana] ref|NP_849600.1| U5 small nuclear ribonucleoprotein component [Arabidopsis thaliana] gb|AAF80219.1|AC025290_8 Contains similarity to an U5 snRNP-specific protein 116 kD from Homo sapiens 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: u5 small nuclear ribonucleoprotein component 0.0
Internal
biog3_v1.0_unigene26260 biogeco3 v1.0 289
• AutoFact: Argonaute/Zwille-like protein n=2 Tax=Picea RepID=Q4PLA9_PICGL 0.0
• FL-Next: tr=Argonaute/Zwille-like protein; Picea glauca (White spruce) (Pinus glauca). 0.0
• Blast2go: argonaute protein group 0.0
Internal
biog3_v1.0_unigene26430 biogeco3 v1.0 188
• AutoFact: Histone H2B n=1 Tax=Arabidopsis lyrata subsp. lyrata RepID=D7MWT0_ARALL 1.99993e-41
• Blast2go: histone h2b 0.0
unknown
biog3_v1.0_unigene26553 biogeco3 v1.0 229
• AutoFact: Histone H2B n=1 Tax=Arabidopsis lyrata subsp. lyrata RepID=D7MWT0_ARALL 1.99993e-41
• FL-Next: tr=Putative histone H4; Pinus pinaster (Maritime pine). 0.0
• Blast2go: histone h2b 0.0
Putative C-terminus
biog3_v1.0_unigene26598 biogeco3 v1.0 280
• AutoFact: 3-ketoacyl-CoA thiolase 2 [Arabidopsis thaliana] sp|Q56WD9.2|THIK2_ARATH RecName: Full=3-ketoacyl-CoA thiolase 2, peroxisomal; AltName: Full=Acetyl-CoA acyltransferase 2; AltName: Full=Beta-ketothiolase 2; AltName: Full=Peroxisomal 3-oxoacyl-CoA thiolase 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: 3-ketoacyl- thiolase 0.0
Complete
biog3_v1.0_unigene26626 biogeco3 v1.0 634
• AutoFact: Histone H2B n=1 Tax=Arabidopsis lyrata subsp. lyrata RepID=D7MWT0_ARALL 1.99993e-41
• FL-Next: tr=Putative histone H4; Pinus pinaster (Maritime pine). 0.0
• Blast2go: histone h2b 0.0
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain