|
Sequence
|
Assembly
|
Length (nt)
|
|
Full-Length
|
|
biog3_v1.0_unigene22790
|
biogeco3 v1.0
|
314
|
|
• AutoFact: nucleoprotein TPR [Arabidopsis thaliana] sp|A4GSN8.1|NUA_ARATH RecName: Full=Nuclear-pore anchor; AltName: Full=Protein TRANSLOCATED PROMOTER REGION; Short=AtTPR gb|ABO21684.1| nuclear-pore anchor [Arabidopsis thaliana] gb|AEE36226.1| nucleoprotein TPR [A
|
2.0e-15
|
|
• FL-Next: sp=Nuclear-pore anchor; Arabidopsis thaliana (Mouse-ear cress).
|
0.0
|
|
• Blast2go: nucleoprotein tpr
|
2.59187e-17
|
|
Internal
|
|
biog3_v1.0_unigene22911
|
biogeco3 v1.0
|
319
|
|
• AutoFact: DNA-directed RNA polymerase n=1 Tax=Ricinus communis RepID=B9RGA8_RICCO
|
2.0e-22
|
|
• FL-Next: sp=DNA-directed RNA polymerase E subunit 1; Arabidopsis thaliana (Mouse-ear cress).
|
0.0
|
|
• Blast2go: the plant-specific rna polymerase iv largest subunit-like protein
|
3.12698e-22
|
|
Internal
|
|
biog3_v1.0_unigene22997
|
biogeco3 v1.0
|
305
|
|
• AutoFact: RNA-dependent RNA polymerase 2 [Arabidopsis thaliana] sp|O82504.1|RDR2_ARATH RecName: Full=RNA-dependent RNA polymerase 2; Short=AtRDRP2; AltName: Full=Protein SILENCING MOVEMENT DEFICIENT 1; AltName: Full=RNA-directed RNA polymerase 2 gb|AAC35535.1| simi
|
8.0e-20
|
|
• Blast2go: rna-dependent rna polymerase 2
|
5.57959e-27
|
|
Putative coding
|
|
biog3_v1.0_unigene23163
|
biogeco3 v1.0
|
223
|
|
• AutoFact: Interferon-induced guanylate-binding protein, putative n=1 Tax=Ricinus communis RepID=B9RB86_RICCO
|
0.0
|
|
• FL-Next: tr=Similarity to guanylate binding protein; Arabidopsis thaliana (Mouse-ear cress).
|
0.0
|
|
• Blast2go: protein
|
0.0
|
|
Internal
|
|
biog3_v1.0_unigene23347
|
biogeco3 v1.0
|
360
|
|
• AutoFact: Prohibitin n=4 Tax=core eudicotyledons RepID=O04361_TOBAC
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape).
|
0.0
|
|
• Blast2go: prohibitin
|
0.0
|
|
C-terminus
|
|
biog3_v1.0_unigene23541
|
biogeco3 v1.0
|
300
|
|
• AutoFact: Histone H2B n=2 Tax=Picea sitchensis RepID=A9NZJ5_PICSI
|
1.99965e-42
|
|
• FL-Next: sp=Histone H2B; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: histone h2b
|
0.0
|
|
C-terminus
|
|
biog3_v1.0_unigene23622
|
biogeco3 v1.0
|
255
|
|
• AutoFact: Arsenite-resistance protein, putative n=1 Tax=Ricinus communis RepID=B9S6M6_RICCO
|
0.0
|
|
• FL-Next: sp=Serrate RNA effector molecule; Arabidopsis thaliana (Mouse-ear cress).
|
0.0
|
|
• Blast2go: serrate rna effector molecule-like
|
0.0
|
|
Internal
|
|
biog3_v1.0_unigene23922
|
biogeco3 v1.0
|
211
|
|
• AutoFact: Histone H2B n=1 Tax=Arabidopsis lyrata subsp. lyrata RepID=D7MWT0_ARALL
|
1.99993e-41
|
|
• Blast2go: histone h2b
|
0.0
|
|
unknown
|
|
biog3_v1.0_unigene23970
|
biogeco3 v1.0
|
205
|
|
• AutoFact: Guanylate-binding protein [Arabidopsis thaliana] gb|AED95334.1| Guanylate-binding protein [Arabidopsis thaliana]
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein Sb04g013170; Sorghum bicolor (Sorghum) (Sorghum vulgare).
|
0.0
|
|
• Blast2go: protein
|
0.0
|
|
Internal
|
|
biog3_v1.0_unigene24013
|
biogeco3 v1.0
|
266
|
|
• AutoFact: DUF1253 multi-domain protein
|
0.0
|
|
• FL-Next: tr=F11A6.3 protein; Arabidopsis thaliana (Mouse-ear cress).
|
0.0
|
|
• Blast2go: digestive organ expansion factor-like protein
|
0.0
|
|
Internal
|
|
biog3_v1.0_unigene24045
|
biogeco3 v1.0
|
2320
|
|
• AutoFact: chaperonin-60 beta subunit [Solanum tuberosum]
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: tcp-1 cpn60 chaperonin family protein
|
0.0
|
|
Complete
|
|
biog3_v1.0_unigene24151
|
biogeco3 v1.0
|
293
|
|
• AutoFact: ROOT HAIRLESS 1 [Arabidopsis thaliana]
|
0.0
|
|
• Blast2go: root hairless 1
|
0.0
|
|
unknown
|
|
biog3_v1.0_unigene24182
|
biogeco3 v1.0
|
286
|
|
• AutoFact: Herpes_gp2 multi-domain protein
|
2.0e-06
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: protein
|
0.0
|
|
C-terminus
|
|
biog3_v1.0_unigene24231
|
biogeco3 v1.0
|
314
|
|
• AutoFact: putative U5 small nuclear ribonucleoprotein helicase [Arabidopsis thaliana] ref|NP_001185050.1| putative U5 small nuclear ribonucleoprotein helicase [Arabidopsis thaliana] gb|AAD30595.1|AC007369_5 Putative RNA helicase [Arabidopsis thaliana] gb|AEE30046.1
|
0.0
|
|
• FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss).
|
0.0
|
|
• Blast2go: u5 small nuclear ribonucleoprotein 200 kda helicase
|
0.0
|
|
Internal
|
|
biog3_v1.0_unigene24363
|
biogeco3 v1.0
|
142
|
|
• AutoFact: small nuclear ribonucleoprotein, putative [Arabidopsis thaliana]
|
1.99965e-42
|
|
• Blast2go: small nuclear ribonucleoprotein sm d3
|
0.0
|
|
unknown
|
|
biog3_v1.0_unigene24725
|
biogeco3 v1.0
|
452
|
|
• AutoFact: Unassigned protein
|
|
|
• FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss).
|
0.0
|
|
• Blast2go: protein rrp5 homolog
|
0.0
|
|
C-terminus
|
|
biog3_v1.0_unigene24780
|
biogeco3 v1.0
|
264
|
|
• AutoFact: 40S ribosomal protein S30 [Arabidopsis thaliana] ref|NP_200478.1| 40S ribosomal protein S30 [Arabidopsis thaliana] ref|NP_565458.1| 40S ribosomal protein S30 [Arabidopsis thaliana] ref|XP_002866160.1| 40S ribosomal protein S30 [Arabidopsis lyrata subsp. l
|
6.0e-19
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: 40s ribosomal protein s30
|
1.23442e-26
|
|
Putative Complete
|
|
biog3_v1.0_unigene24880
|
biogeco3 v1.0
|
209
|
|
• AutoFact: Ubiquitin-60S ribosomal protein L40-1 n=69 Tax=Eukaryota RepID=RL40A_ARATH
|
0.0
|
|
• Blast2go: ubiquitin fusion protein
|
0.0
|
|
unknown
|
|
biog3_v1.0_unigene25101
|
biogeco3 v1.0
|
191
|
|
• AutoFact: ribosome biogenesis regulatory protein-like protein [Arabidopsis thaliana] sp|Q9SH88.2|RRS1_ARATH RecName: Full=Ribosome biogenesis regulatory protein homolog dbj|BAE98464.1| hypothetical protein [Arabidopsis thaliana] gb|AEC09475.1| ribosome biogenesis r
|
0.0
|
|
• Blast2go: ribosome biogenesis regulatory protein
|
0.0
|
|
unknown
|
|
biog3_v1.0_unigene25103
|
biogeco3 v1.0
|
147
|
|
• AutoFact: RecName: Full=Formin-like protein 1; AltName: Full=OsFH1; Flags: Precursor dbj|BAB86073.1| putative FH protein NFH2 [Oryza sativa Japonica Group] dbj|BAC06896.1| putative FH protein NFH2 [Oryza sativa Japonica Group]
|
5.0e-09
|
|
• FL-Next: sp=Formin-like protein 11; Arabidopsis thaliana (Mouse-ear cress).
|
0.0
|
|
• Blast2go: formin-like protein 6-like
|
3.0693e-12
|
|
Internal
|
