|
Sequence
|
Assembly
|
Length (nt)
|
|
Full-Length
|
|
biog3_v1.0_unigene19783
|
biogeco3 v1.0
|
177
|
|
• AutoFact: putative U5 small nuclear ribonucleoprotein helicase [Arabidopsis thaliana] ref|NP_001185050.1| putative U5 small nuclear ribonucleoprotein helicase [Arabidopsis thaliana] gb|AAD30595.1|AC007369_5 Putative RNA helicase [Arabidopsis thaliana] gb|AEE30046.1
|
0.0
|
|
• FL-Next: tr=U520, putative; Ricinus communis (Castor bean).
|
0.0
|
|
• Blast2go: u5 small nuclear ribonucleoprotein 200 kda helicase
|
0.0
|
|
Internal
|
|
biog3_v1.0_unigene19871
|
biogeco3 v1.0
|
239
|
|
• AutoFact: nucleoprotein TPR [Arabidopsis thaliana] sp|A4GSN8.1|NUA_ARATH RecName: Full=Nuclear-pore anchor; AltName: Full=Protein TRANSLOCATED PROMOTER REGION; Short=AtTPR gb|ABO21684.1| nuclear-pore anchor [Arabidopsis thaliana] gb|AEE36226.1| nucleoprotein TPR [A
|
0.0
|
|
• FL-Next: sp=Nuclear-pore anchor; Arabidopsis thaliana (Mouse-ear cress).
|
0.0
|
|
• Blast2go: nucleoprotein tpr
|
0.0
|
|
Internal
|
|
biog3_v1.0_unigene19874
|
biogeco3 v1.0
|
218
|
|
• AutoFact: nucleoprotein TPR [Arabidopsis thaliana] sp|A4GSN8.1|NUA_ARATH RecName: Full=Nuclear-pore anchor; AltName: Full=Protein TRANSLOCATED PROMOTER REGION; Short=AtTPR gb|ABO21684.1| nuclear-pore anchor [Arabidopsis thaliana] gb|AEE36226.1| nucleoprotein TPR [A
|
2.0e-19
|
|
• FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss).
|
0.0
|
|
• Blast2go: nucleoprotein tpr
|
7.22623e-32
|
|
N-terminus
|
|
biog3_v1.0_unigene20072
|
biogeco3 v1.0
|
219
|
|
• AutoFact: small nuclear ribonucleoprotein, putative [Arabidopsis thaliana]
|
0.0
|
|
• Blast2go: small nuclear ribonucleoprotein sm d3
|
0.0
|
|
unknown
|
|
biog3_v1.0_unigene20166
|
biogeco3 v1.0
|
150
|
|
• AutoFact: putative ATP/GTP binding protein [Ananas comosus]
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: atp gtp binding protein
|
0.0
|
|
N-terminus
|
|
biog3_v1.0_unigene20253
|
biogeco3 v1.0
|
340
|
|
• AutoFact: CCAAT-box-binding transcription factor-like protein n=3 Tax=Oryza sativa RepID=Q6YU01_ORYSJ
|
0.0
|
|
• Blast2go: ccaat enhancer-binding protein zeta-like
|
0.0
|
|
Coding
|
|
biog3_v1.0_unigene20264
|
biogeco3 v1.0
|
293
|
|
• AutoFact: Actin related protein n=2 Tax=Malpighiales RepID=B9I2R4_POPTR
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: actin-related protein
|
0.0
|
|
Putative N-terminus
|
|
biog3_v1.0_unigene20313
|
biogeco3 v1.0
|
276
|
|
• AutoFact: pfam00270, DEAD, DEAD/DEAH box helicase
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: protein
|
0.0
|
|
Putative C-terminus
|
|
biog3_v1.0_unigene20445
|
biogeco3 v1.0
|
271
|
|
• AutoFact: putative arginine/serine-rich protein [Arabidopsis thaliana]
|
9.99967e-42
|
|
• Blast2go: protein arginine serine-rich 45
|
0.0
|
|
unknown
|
|
biog3_v1.0_unigene20463
|
biogeco3 v1.0
|
265
|
|
• AutoFact: nucleoprotein TPR [Arabidopsis thaliana] sp|A4GSN8.1|NUA_ARATH RecName: Full=Nuclear-pore anchor; AltName: Full=Protein TRANSLOCATED PROMOTER REGION; Short=AtTPR gb|ABO21684.1| nuclear-pore anchor [Arabidopsis thaliana] gb|AEE36226.1| nucleoprotein TPR [A
|
0.0
|
|
• FL-Next: sp=Nuclear-pore anchor; Arabidopsis thaliana (Mouse-ear cress).
|
0.0
|
|
• Blast2go: nucleoprotein tpr
|
0.0
|
|
Internal
|
|
biog3_v1.0_unigene20517
|
biogeco3 v1.0
|
265
|
|
• AutoFact: pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [Arabidopsis thaliana] emb|CAB82945.1| ATP-dependent RNA helicase-like protein [Arabidopsis thaliana] gb|AAM53340.1| ATP-dependent RNA helicase-like protein [Arabidopsis thaliana] gb|AAQ56774
|
0.0
|
|
• FL-Next: sp=Probable pre-mRNA-splicing factor ATP-dependent RNA helicase; Arabidopsis thaliana (Mouse-ear cress).
|
0.0
|
|
• Blast2go: pre-mrna-splicing factor atp-dependent rna helicase
|
0.0
|
|
Internal
|
|
biog3_v1.0_unigene20619
|
biogeco3 v1.0
|
262
|
|
• AutoFact: Whole genome shotgun sequence of line PN40024, scaffold_5.assembly12x (Fragment) n=1 Tax=Vitis vinifera RepID=D7U2L0_VITVI
|
2.0e-11
|
|
• FL-Next: sp=Probable pre-mRNA-splicing factor ATP-dependent RNA helicase; Arabidopsis thaliana (Mouse-ear cress).
|
0.0
|
|
• Blast2go: pre-mrna-splicing factor atp-dependent rna helicase
|
4.2284e-14
|
|
N-terminus
|
|
biog3_v1.0_unigene20649
|
biogeco3 v1.0
|
329
|
|
• AutoFact: Prohibitin n=4 Tax=core eudicotyledons RepID=O04361_TOBAC
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: prohibitin
|
0.0
|
|
Internal
|
|
biog3_v1.0_unigene20656
|
biogeco3 v1.0
|
223
|
|
• AutoFact: Interferon-induced guanylate-binding protein, putative n=1 Tax=Ricinus communis RepID=B9RB86_RICCO
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: protein
|
0.0
|
|
Internal
|
|
biog3_v1.0_unigene20818
|
biogeco3 v1.0
|
428
|
|
• AutoFact: Serine/threonine protein kinase, putative n=1 Tax=Ricinus communis RepID=B9SWQ3_RICCO
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: protein kinase g11a-like
|
0.0
|
|
Internal
|
|
biog3_v1.0_unigene20914
|
biogeco3 v1.0
|
298
|
|
• AutoFact: ribosomal protein L1p/L10e family protein [Arabidopsis thaliana] emb|CAB88283.1| putative protein [Arabidopsis thaliana] gb|AAL49900.1| unknown protein [Arabidopsis thaliana] gb|AEE79812.1| ribosomal protein L1p/L10e family protein [Arabidopsis thaliana]
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: protein
|
0.0
|
|
N-terminus
|
|
biog3_v1.0_unigene21096
|
biogeco3 v1.0
|
310
|
|
• AutoFact: serrate RNA effector molecule [Arabidopsis thaliana] sp|Q9ZVD0.2|SRRT_ARATH RecName: Full=Serrate RNA effector molecule gb|AAK63206.1|AF311221_1 C2H2 zinc-finger protein SERRATE [Arabidopsis thaliana] gb|AAL16137.1|AF428305_1 At2g27100/T20P8.15 [Arabidops
|
0.0
|
|
• FL-Next: sp=Serrate RNA effector molecule; Arabidopsis thaliana (Mouse-ear cress).
|
0.0
|
|
• Blast2go: serrate rna effector molecule-like
|
0.0
|
|
Internal
|
|
biog3_v1.0_unigene21159
|
biogeco3 v1.0
|
238
|
|
• AutoFact: uncharacterized protein [Arabidopsis thaliana] gb|AAF27096.1|AC011809_5 Unknown protein [Arabidopsis thaliana] gb|AAL07061.1| unknown protein [Arabidopsis thaliana] gb|AAM20279.1| unknown protein [Arabidopsis thaliana] gb|AEE29771.1| uncharacterized prote
|
2.99878e-43
|
|
• FL-Next: tr=Putative uncharacterized protein; Ricinus communis (Castor bean).
|
0.0
|
|
• Blast2go: uncharacterized protein
|
0.0
|
|
Internal
|
|
biog3_v1.0_unigene21177
|
biogeco3 v1.0
|
289
|
|
• AutoFact: U1snRNP-specific protein, U1A n=1 Tax=Solanum tuberosum RepID=Q41498_SOLTU
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: small nuclear ribonucleoprotein u1a
|
0.0
|
|
C-terminus
|
|
biog3_v1.0_unigene21277
|
biogeco3 v1.0
|
278
|
|
• AutoFact: uncharacterized protein [Arabidopsis thaliana] gb|AAF27096.1|AC011809_5 Unknown protein [Arabidopsis thaliana] gb|AAL07061.1| unknown protein [Arabidopsis thaliana] gb|AAM20279.1| unknown protein [Arabidopsis thaliana] gb|AEE29771.1| uncharacterized prote
|
2.99878e-43
|
|
• FL-Next: tr=Putative uncharacterized protein; Arabidopsis lyrata subsp. lyrata (Lyre-leaved rock-cress).
|
0.0
|
|
• Blast2go: uncharacterized protein
|
0.0
|
|
Putative C-terminus
|
