Sustainpine_db
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Assembly Name: biogeco3 v1.0

Name: nucleolus

Term: GO:0005730  Help

Source: GO from Blast2go

Ontology: Cellular Component


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog3_v1.0_unigene16925 biogeco3 v1.0 196
AutoFact: Protein arginine N-methyltransferase 1 n=2 Tax=Andropogoneae RepID=B6TIG8_MAIZE 0.0
Blast2go: arginine methyltransferease 0.0
unknown
biog3_v1.0_unigene17229 biogeco3 v1.0 224
AutoFact: WD-repeat protein, putative n=1 Tax=Ricinus communis RepID=B9S0D0_RICCO 0.0
FL-Next: tr=WD-repeat protein, putative; Ricinus communis (Castor bean). 0.0
Blast2go: wd repeat-containing protein 3-like 0.0
Internal
biog3_v1.0_unigene17552 biogeco3 v1.0 137
AutoFact: homolog of nucleolar protein NOP56 [Arabidopsis thaliana] gb|AAF02835.1|AC009894_6 nucleolar protein [Arabidopsis thaliana] gb|AAG40838.1|AF302492_1 NOP56-like protein [Arabidopsis thaliana] gb|AAK62596.1| At1g56110/T6H22_9 [Arabidopsis thaliana] gb|AAM26 0.0
Blast2go: nucleolar protein 0.0
unknown
biog3_v1.0_unigene17720 biogeco3 v1.0 210
AutoFact: pfam02731, SKIP_SNW, SKIP/SNW domain 0.0
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: chromatin protein family 0.0
Internal
biog3_v1.0_unigene18093 biogeco3 v1.0 229
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: protein rrp5 homolog 0.0
Internal
biog3_v1.0_unigene18183 biogeco3 v1.0 148
AutoFact: end binding protein 1C [Arabidopsis thaliana] dbj|BAB09646.1| unnamed protein product [Arabidopsis thaliana] gb|AAM65311.1| microtubule-associated protein EB1-like protein [Arabidopsis thaliana] dbj|BAD43258.1| unknown protein [Arabidopsis thaliana] gb|AB 1.0e-18
Blast2go: protein 0.0
unknown
biog3_v1.0_unigene18206 biogeco3 v1.0 96
AutoFact: nucleoprotein TPR [Arabidopsis thaliana] sp|A4GSN8.1|NUA_ARATH RecName: Full=Nuclear-pore anchor; AltName: Full=Protein TRANSLOCATED PROMOTER REGION; Short=AtTPR gb|ABO21684.1| nuclear-pore anchor [Arabidopsis thaliana] gb|AEE36226.1| nucleoprotein TPR [A 0.0
Blast2go: nucleoprotein tpr 0.0
unknown
biog3_v1.0_unigene18326 biogeco3 v1.0 343
AutoFact: Histone H4 n=1 Tax=Camellia sinensis RepID=F4YF87_CAMSI 5.0e-38
FL-Next: sp=Histone H4; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone h4 0.0
Putative Complete
biog3_v1.0_unigene18339 biogeco3 v1.0 283
AutoFact: serine/threonine-protein kinase aurora-1 [Arabidopsis thaliana] sp|Q9M077.1|AUR1_ARATH RecName: Full=Serine/threonine-protein kinase Aurora-1; Short=AtAur1; AltName: Full=Aurora-like kinase 1 emb|CAB80000.1| putative serine/threonine protein kinase [Arabi 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Internal
biog3_v1.0_unigene18666 biogeco3 v1.0 141
AutoFact: small nuclear ribonucleoprotein associated protein B [Arabidopsis thaliana] ref|NP_849414.1| small nuclear ribonucleoprotein associated protein B [Arabidopsis thaliana] ref|NP_001031682.1| small nuclear ribonucleoprotein associated protein B [Arabidopsis 3.0e-30
Blast2go: small nuclear ribonucleoprotein associated protein b 8.18162e-41
unknown
biog3_v1.0_unigene18787 biogeco3 v1.0 2870
AutoFact: Elongation factor 2 n=32 Tax=Magnoliophyta RepID=EF2_BETVU 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: elongation factor ef-2 0.0
Complete
biog3_v1.0_unigene18888 biogeco3 v1.0 125
AutoFact: F1F0-ATPase inhibitor protein [Arabidopsis thaliana] 2.0e-08
Blast2go: f1f0-atpase inhibitor protein 1.83481e-39
unknown
biog3_v1.0_unigene18969 biogeco3 v1.0 250
AutoFact: Heat-shock protein-like protein n=1 Tax=Cucumis melo subsp. melo RepID=Q84KA7_CUCME 0.0
FL-Next: tr=Putative uncharacterized protein; Ricinus communis (Castor bean). 0.0
Blast2go: alpha-crystallin domain of heat shock protein-containing protein 0.0
Internal
biog3_v1.0_unigene19129 biogeco3 v1.0 557
AutoFact: pantothenate kinase 2 (Hallervorden-Spatz syndrome) [Rattus norvegicus] gb|EDL80236.1| pantothenate kinase 2 (Hallervorden-Spatz syndrome) (predicted), isoform CRA_a [Rattus norvegicus] 5.04467e-44
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: pantothenate kinase 1 0.0
Internal
biog3_v1.0_unigene19260 biogeco3 v1.0 134
AutoFact: 60S ribosomal protein L4 n=1 Tax=Prunus armeniaca RepID=RL4_PRUAR 0.0
Blast2go: 60s ribosomal protein l4-1 0.0
unknown
biog3_v1.0_unigene19263 biogeco3 v1.0 326
AutoFact: U2 small nuclear ribonucleoprotein A n=1 Tax=Gossypium hirsutum RepID=D6N3G9_GOSHI 0.0
FL-Next: sp=U2 small nuclear ribonucleoprotein A'; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: u2 small nuclear ribonucleoprotein a 0.0
N-terminus
biog3_v1.0_unigene19487 biogeco3 v1.0 151
AutoFact: putative pre-rRNA processing protein, 5' partial [Arabidopsis thaliana] 7.0e-28
FL-Next: tr=Pre-rRNA processing protein RRP5; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein rrp5 homolog 9.86014e-33
Internal
biog3_v1.0_unigene19550 biogeco3 v1.0 329
AutoFact: Elongation factor Tu n=3 Tax=Spermatophyta RepID=A9NWL9_PICSI 0.0
FL-Next: sp=Elongation factor Tu; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: elongation factor chloroplastic-like 0.0
Putative N-terminus
biog3_v1.0_unigene19661 biogeco3 v1.0 162
AutoFact: U5 small nuclear ribonucleoprotein component [Arabidopsis thaliana] ref|NP_849600.1| U5 small nuclear ribonucleoprotein component [Arabidopsis thaliana] gb|AAF80219.1|AC025290_8 Contains similarity to an U5 snRNP-specific protein 116 kD from Homo sapiens 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: u5 small nuclear ribonucleoprotein component 0.0
Internal
biog3_v1.0_unigene19751 biogeco3 v1.0 301
AutoFact: Histone H4 n=7 Tax=Neoptera RepID=E0VXR9_PEDHC 2.0e-38
FL-Next: sp=Histone H4; Picea abies (Norway spruce) (Picea excelsa). 0.0
Blast2go: histone h4 0.0
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain