|
Sequence
|
Assembly
|
Length (nt)
|
|
Full-Length
|
|
biog3_v1.0_unigene13789
|
biogeco3 v1.0
|
442
|
|
• AutoFact: pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [Arabidopsis thaliana] emb|CAB82945.1| ATP-dependent RNA helicase-like protein [Arabidopsis thaliana] gb|AAM53340.1| ATP-dependent RNA helicase-like protein [Arabidopsis thaliana] gb|AAQ56774
|
0.0
|
|
• FL-Next: sp=Probable pre-mRNA-splicing factor ATP-dependent RNA helicase; Arabidopsis thaliana (Mouse-ear cress).
|
0.0
|
|
• Blast2go: pre-mrna-splicing factor atp-dependent rna helicase
|
0.0
|
|
Internal
|
|
biog3_v1.0_unigene13798
|
biogeco3 v1.0
|
342
|
|
• AutoFact: Nucleoporin interacting component; Protein prenyltransferase [Medicago truncatula]
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: uncharacterized protein at2g41620-like
|
0.0
|
|
Internal
|
|
biog3_v1.0_unigene13814
|
biogeco3 v1.0
|
399
|
|
• AutoFact: Interferon-induced guanylate-binding protein, putative n=1 Tax=Ricinus communis RepID=B9RB86_RICCO
|
0.0
|
|
• FL-Next: tr=Predicted protein; subsp. trichocarpa).
|
0.0
|
|
• Blast2go: protein
|
0.0
|
|
Internal
|
|
biog3_v1.0_unigene13817
|
biogeco3 v1.0
|
310
|
|
• AutoFact: PREDICTED: histone deacetylase 6-like isoform 8 [Macaca mulatta]
|
5.0e-22
|
|
• Blast2go: histone deacetylase
|
0.0
|
|
unknown
|
|
biog3_v1.0_unigene13880
|
biogeco3 v1.0
|
131
|
|
• AutoFact: Proliferating-cell nucleolar antigen p120, putative n=1 Tax=Ricinus communis RepID=B9S9W8_RICCO
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: ribosomal rna methyltransferase nop2-like
|
0.0
|
|
Putative C-terminus
|
|
biog3_v1.0_unigene14023
|
biogeco3 v1.0
|
226
|
|
• AutoFact: Rrp15p multi-domain protein
|
8.0e-25
|
|
• Blast2go: uncharacterized protein
|
0.0
|
|
unknown
|
|
biog3_v1.0_unigene14080
|
biogeco3 v1.0
|
343
|
|
• AutoFact: Protein arginine N-methyltransferase 1 n=2 Tax=Andropogoneae RepID=B6TIG8_MAIZE
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: arginine methyltransferease
|
0.0
|
|
C-terminus
|
|
biog3_v1.0_unigene14168
|
biogeco3 v1.0
|
220
|
|
• AutoFact: RNA recognition motif-containing protein [Arabidopsis thaliana] ref|NP_974317.1| RNA recognition motif-containing protein [Arabidopsis thaliana] dbj|BAA97064.1| unnamed protein product [Arabidopsis thaliana] gb|AAL36202.1| putative RNA-binding protein [Ar
|
0.0
|
|
• Blast2go: rna recognition motif-containing protein
|
0.0
|
|
unknown
|
|
biog3_v1.0_unigene14200
|
biogeco3 v1.0
|
214
|
|
• AutoFact: Unassigned protein
|
|
|
• Blast2go: protein rrp5 homolog
|
0.0
|
|
unknown
|
|
biog3_v1.0_unigene14218
|
biogeco3 v1.0
|
381
|
|
• AutoFact: C2H2-type zinc finger protein, putative n=1 Tax=Arabidopsis thaliana RepID=Q9C7G8_ARATH
|
9.0e-15
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: transcription factor iiia
|
3.31325e-17
|
|
Internal
|
|
biog3_v1.0_unigene14551
|
biogeco3 v1.0
|
157
|
|
• AutoFact: Ubiquitin-60S ribosomal protein L40-1 n=69 Tax=Eukaryota RepID=RL40A_ARATH
|
0.0
|
|
• Blast2go: ubiquitin a-52 residue ribosomal protein fusion product 1
|
0.0
|
|
unknown
|
|
biog3_v1.0_unigene14614
|
biogeco3 v1.0
|
269
|
|
• AutoFact: large subunit ribosomal protein L24e [Arabidopsis thaliana] ref|NP_001078059.1| large subunit ribosomal protein L24e [Arabidopsis thaliana] sp|O22165.1|RLP24_ARATH RecName: Full=Probable ribosome biogenesis protein RLP24 gb|AAC31838.1| 60S ribosomal prote
|
0.0
|
|
• Blast2go: large subunit ribosomal protein l24e
|
0.0
|
|
unknown
|
|
biog3_v1.0_unigene14700
|
biogeco3 v1.0
|
263
|
|
• AutoFact: pfam10243, MIP-T3, Microtubule-binding protein MIP-T3
|
4.0e-05
|
|
• Blast2go: protein
|
1.71025e-33
|
|
Putative coding
|
|
biog3_v1.0_unigene14810
|
biogeco3 v1.0
|
280
|
|
• AutoFact: Histone H2B n=1 Tax=Arabidopsis lyrata subsp. lyrata RepID=D7MWT0_ARALL
|
1.99993e-41
|
|
• Blast2go: histone h2b
|
0.0
|
|
unknown
|
|
biog3_v1.0_unigene14901
|
biogeco3 v1.0
|
1263
|
|
• AutoFact: 40S ribosomal S4 protein [Glycine max] gb|ACU21252.1| unknown [Glycine max]
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: protein
|
0.0
|
|
Complete
|
|
biog3_v1.0_unigene14932
|
biogeco3 v1.0
|
359
|
|
• AutoFact: Interferon-induced guanylate-binding protein, putative n=1 Tax=Ricinus communis RepID=B9RB86_RICCO
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: protein
|
0.0
|
|
Internal
|
|
biog3_v1.0_unigene14970
|
biogeco3 v1.0
|
287
|
|
• AutoFact: pfam02731, SKIP_SNW, SKIP/SNW domain
|
0.0
|
|
• FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss).
|
0.0
|
|
• Blast2go: chromatin protein family
|
0.0
|
|
N-terminus
|
|
biog3_v1.0_unigene15050
|
biogeco3 v1.0
|
638
|
|
• AutoFact: Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Ricinus communis RepID=B9S2Y0_RICCO
|
0.0
|
|
• FL-Next: sp=Ubiquitin carboxyl-terminal hydrolase 26; Oryza sativa subsp. japonica (Rice).
|
0.0
|
|
• Blast2go: ubiquitin carboxyl-terminal hydrolase 26-like
|
0.0
|
|
N-terminus
|
|
biog3_v1.0_unigene15139
|
biogeco3 v1.0
|
447
|
|
• AutoFact: putative arginine/serine-rich protein [Arabidopsis thaliana]
|
9.99967e-42
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: protein arginine serine-rich 45
|
0.0
|
|
Internal
|
|
biog3_v1.0_unigene15313
|
biogeco3 v1.0
|
270
|
|
• AutoFact: DUF1253 multi-domain protein
|
0.0
|
|
• Blast2go: digestive organ expansion factor-like protein
|
0.0
|
|
Coding
|
