|
Sequence
|
Assembly
|
Length (nt)
|
|
Full-Length
|
|
biog3_v1.0_unigene2714
|
biogeco3 v1.0
|
312
|
|
• AutoFact: PREDICTED: similar to Polyadenylate-binding protein 4 (Poly(A)-binding protein 4) (PABP 4) (Inducible poly(A)-binding protein) (iPABP) (Activated-platelet protein-1) (APP-1) isoform 17 [Canis familiaris]
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: poly binding cytoplasmic 1
|
0.0
|
|
Putative N-terminus
|
|
biog3_v1.0_unigene3044
|
biogeco3 v1.0
|
244
|
|
• AutoFact: RNA-binding protein, putative n=1 Tax=Ricinus communis RepID=B9T403_RICCO
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein Sb03g033240; Sorghum bicolor (Sorghum) (Sorghum vulgare).
|
0.0
|
|
• Blast2go: rna-binding protein 5 10
|
0.0
|
|
Internal
|
|
biog3_v1.0_unigene3213
|
biogeco3 v1.0
|
818
|
|
• AutoFact: putative arginine/serine-rich protein [Arabidopsis thaliana]
|
9.99967e-42
|
|
• Blast2go: protein arginine serine-rich 45
|
0.0
|
|
Coding
|
|
biog3_v1.0_unigene3317
|
biogeco3 v1.0
|
705
|
|
• AutoFact: splicing factor [Arabidopsis thaliana]
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: arginine serine-rich-splicing factor rsp31-like
|
0.0
|
|
Complete
|
|
biog3_v1.0_unigene3467
|
biogeco3 v1.0
|
512
|
|
• AutoFact: putative pre-mRNA splicing factor [Oryza sativa Japonica Group] gb|AAP54456.1| U5 snRNP-associated 102 kDa protein, putative, expressed [Oryza sativa Japonica Group] gb|EAY79087.1| hypothetical protein OsI_34194 [Oryza sativa Indica Group]
|
0.0
|
|
• FL-Next: sp=PsbB mRNA maturation factor Mbb1, chloroplastic; Chlamydomonas reinhardtii (Chlamydomonas smithii).
|
0.0
|
|
• Blast2go: pre-mrna splicing factor
|
0.0
|
|
Internal
|
|
biog3_v1.0_unigene4026
|
biogeco3 v1.0
|
395
|
|
• AutoFact: RNA-binding protein, putative n=1 Tax=Ricinus communis RepID=B9T403_RICCO
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape).
|
0.0
|
|
• Blast2go: rna-binding protein 5 10
|
0.0
|
|
Internal
|
|
biog3_v1.0_unigene4310
|
biogeco3 v1.0
|
987
|
|
• AutoFact: U1 small nuclear ribonucleoprotein 70 kDa, putative n=1 Tax=Ricinus communis RepID=B9S6I9_RICCO
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: u1 small nuclear ribonucleoprotein-70k
|
0.0
|
|
N-terminus
|
|
biog3_v1.0_unigene5033
|
biogeco3 v1.0
|
1206
|
|
• AutoFact: U1 small nuclear ribonucleoprotein 70 kDa, putative n=1 Tax=Ricinus communis RepID=B9S6I9_RICCO
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: u1 small nuclear ribonucleoprotein-70k
|
0.0
|
|
N-terminus
|
|
biog3_v1.0_unigene5850
|
biogeco3 v1.0
|
1857
|
|
• AutoFact: Pre-mRNA-processing-splicing factor [Arabidopsis thaliana] gb|AAD55467.1|AC009322_7 Putative splicing factor Prp8 [Arabidopsis thaliana] gb|AEE36353.1| Pre-mRNA-processing-splicing factor [Arabidopsis thaliana]
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: pre-mrna-processing-splicing factor 8-like
|
0.0
|
|
Putative Complete
|
|
biog3_v1.0_unigene7636
|
biogeco3 v1.0
|
280
|
|
• AutoFact: pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [Arabidopsis thaliana] emb|CAB82945.1| ATP-dependent RNA helicase-like protein [Arabidopsis thaliana] gb|AAM53340.1| ATP-dependent RNA helicase-like protein [Arabidopsis thaliana] gb|AAQ56774
|
0.0
|
|
• FL-Next: sp=Probable pre-mRNA-splicing factor ATP-dependent RNA helicase; Arabidopsis thaliana (Mouse-ear cress).
|
0.0
|
|
• Blast2go: pre-mrna-splicing factor atp-dependent rna helicase
|
0.0
|
|
Internal
|
|
biog3_v1.0_unigene8452
|
biogeco3 v1.0
|
194
|
|
• AutoFact: RNA-binding protein, putative n=1 Tax=Ricinus communis RepID=B9T403_RICCO
|
0.0
|
|
• Blast2go: rna-binding protein 5 10
|
0.0
|
|
unknown
|
|
biog3_v1.0_unigene9440
|
biogeco3 v1.0
|
323
|
|
• AutoFact: putative pre-mRNA splicing factor [Oryza sativa Japonica Group] gb|AAP54456.1| U5 snRNP-associated 102 kDa protein, putative, expressed [Oryza sativa Japonica Group] gb|EAY79087.1| hypothetical protein OsI_34194 [Oryza sativa Indica Group]
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape).
|
0.0
|
|
• Blast2go: pre-mrna splicing factor
|
0.0
|
|
Internal
|
|
biog3_v1.0_unigene10158
|
biogeco3 v1.0
|
757
|
|
• AutoFact: RNA-binding protein, putative n=1 Tax=Ricinus communis RepID=B9T403_RICCO
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: rna-binding protein 5 10
|
0.0
|
|
N-terminus
|
|
biog3_v1.0_unigene11117
|
biogeco3 v1.0
|
501
|
|
• AutoFact: Splicing factor-like protein n=3 Tax=Vitis RepID=Q6R4Q7_VITRI
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: arginine serine-rich-splicing factor rsp40
|
0.0
|
|
Internal
|
|
biog3_v1.0_unigene11766
|
biogeco3 v1.0
|
525
|
|
• AutoFact: RNA helicase [Arabidopsis thaliana] gb|AAD39319.1|AC007258_8 Very similar to helicases [Arabidopsis thaliana] dbj|BAD44599.1| hypothetical protein [Arabidopsis thaliana] gb|AEE33616.1| RNA helicase [Arabidopsis thaliana]
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: skiv2l2 protein
|
0.0
|
|
C-terminus
|
|
biog3_v1.0_unigene13789
|
biogeco3 v1.0
|
442
|
|
• AutoFact: pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [Arabidopsis thaliana] emb|CAB82945.1| ATP-dependent RNA helicase-like protein [Arabidopsis thaliana] gb|AAM53340.1| ATP-dependent RNA helicase-like protein [Arabidopsis thaliana] gb|AAQ56774
|
0.0
|
|
• FL-Next: sp=Probable pre-mRNA-splicing factor ATP-dependent RNA helicase; Arabidopsis thaliana (Mouse-ear cress).
|
0.0
|
|
• Blast2go: pre-mrna-splicing factor atp-dependent rna helicase
|
0.0
|
|
Internal
|
|
biog3_v1.0_unigene15139
|
biogeco3 v1.0
|
447
|
|
• AutoFact: putative arginine/serine-rich protein [Arabidopsis thaliana]
|
9.99967e-42
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: protein arginine serine-rich 45
|
0.0
|
|
Internal
|
|
biog3_v1.0_unigene16446
|
biogeco3 v1.0
|
223
|
|
• AutoFact: Splicing factor-like protein n=3 Tax=Vitis RepID=Q6R4Q7_VITRI
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: arginine serine-rich-splicing factor rsp40-like
|
0.0
|
|
Putative N-terminus
|
|
biog3_v1.0_unigene18574
|
biogeco3 v1.0
|
210
|
|
• AutoFact: U4/U6 small nuclear ribonucleoprotein PRP4-like protein [Arabidopsis thaliana] sp|O22212.1|PRP4_ARATH RecName: Full=U4/U6 small nuclear ribonucleoprotein PRP4-like protein; AltName: Full=Protein EMBRYO DEFECTIVE 2776 gb|AAB84332.1| putative small nuclear
|
0.0
|
|
• FL-Next: sp=U4/U6 small nuclear ribonucleoprotein PRP4-like protein; Arabidopsis thaliana (Mouse-ear cress).
|
0.0
|
|
• Blast2go: u4 u6 small nuclear ribonucleoprotein prp4-like
|
0.0
|
|
Internal
|
|
biog3_v1.0_unigene19263
|
biogeco3 v1.0
|
326
|
|
• AutoFact: U2 small nuclear ribonucleoprotein A n=1 Tax=Gossypium hirsutum RepID=D6N3G9_GOSHI
|
0.0
|
|
• FL-Next: sp=U2 small nuclear ribonucleoprotein A'; Arabidopsis thaliana (Mouse-ear cress).
|
0.0
|
|
• Blast2go: u2 small nuclear ribonucleoprotein a
|
0.0
|
|
N-terminus
|
