Sustainpine_db
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Assembly Name: biogeco3 v1.0

Name: nuclear mRNA splicing, via spliceosome

Term: GO:0000398  Help

Source: GO from Blast2go

Ontology: Biological Process

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
biog3_v1.0_unigene20242 biogeco3 v1.0 306
• AutoFact: RNA binding protein n=3 Tax=Andropogoneae RepID=B6TN55_MAIZE 0.0
• Blast2go: rna binding protein 0.0
unknown
biog3_v1.0_unigene20445 biogeco3 v1.0 271
• AutoFact: putative arginine/serine-rich protein [Arabidopsis thaliana] 9.99967e-42
• Blast2go: protein arginine serine-rich 45 0.0
unknown
biog3_v1.0_unigene20517 biogeco3 v1.0 265
• AutoFact: pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [Arabidopsis thaliana] emb|CAB82945.1| ATP-dependent RNA helicase-like protein [Arabidopsis thaliana] gb|AAM53340.1| ATP-dependent RNA helicase-like protein [Arabidopsis thaliana] gb|AAQ56774 0.0
• FL-Next: sp=Probable pre-mRNA-splicing factor ATP-dependent RNA helicase; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: pre-mrna-splicing factor atp-dependent rna helicase 0.0
Internal
biog3_v1.0_unigene21238 biogeco3 v1.0 238
• AutoFact: putative splicing factor Prp8 [Oryza sativa Japonica Group] 0.0
• FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
• Blast2go: pre-mrna-processing-splicing factor 0.0
Internal
biog3_v1.0_unigene22358 biogeco3 v1.0 292
• AutoFact: pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [Arabidopsis thaliana] emb|CAB82945.1| ATP-dependent RNA helicase-like protein [Arabidopsis thaliana] gb|AAM53340.1| ATP-dependent RNA helicase-like protein [Arabidopsis thaliana] gb|AAQ56774 0.0
• FL-Next: sp=Probable pre-mRNA-splicing factor ATP-dependent RNA helicase; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: pre-mrna-splicing factor atp-dependent rna helicase 0.0
Internal
biog3_v1.0_unigene22485 biogeco3 v1.0 208
• AutoFact: Pre-mRNA-processing-splicing factor [Arabidopsis thaliana] gb|AAD55467.1|AC009322_7 Putative splicing factor Prp8 [Arabidopsis thaliana] gb|AEE36353.1| Pre-mRNA-processing-splicing factor [Arabidopsis thaliana] 0.0
• FL-Next: tr=Putative uncharacterized protein Sb10g004680; Sorghum bicolor (Sorghum) (Sorghum vulgare). 0.0
• Blast2go: pre-mrna-processing-splicing factor 8-like 0.0
Internal
biog3_v1.0_unigene24028 biogeco3 v1.0 133
• AutoFact: Splicing factor-like protein n=3 Tax=Vitis RepID=Q6R4Q7_VITRI 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: arginine serine-rich-splicing factor rsp40-like 0.0
Internal
biog3_v1.0_unigene25774 biogeco3 v1.0 623
• AutoFact: Splicing factor-like protein n=3 Tax=Vitis RepID=Q6R4Q7_VITRI 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: arginine serine-rich-splicing factor rsp40-like 0.0
Putative N-terminus
biog3_v1.0_unigene26419 biogeco3 v1.0 338
• AutoFact: Splicing factor-like protein n=3 Tax=Vitis RepID=Q6R4Q7_VITRI 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: arginine serine-rich-splicing factor rsp40-like 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain