|
Sequence
|
Assembly
|
Length (nt)
|
|
Full-Length
|
|
biog3_v1.0_unigene1428
|
biogeco3 v1.0
|
822
|
|
• AutoFact: RecName: Full=ATP-dependent Clp protease ATP-binding subunit clpA homolog CD4B, chloroplastic; Flags: Precursor gb|AAA34161.1| ATP-dependent protease (CD4B) [Solanum lycopersicum]
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: chaperone protein chloroplastic-like
|
0.0
|
|
C-terminus
|
|
biog3_v1.0_unigene2039
|
biogeco3 v1.0
|
684
|
|
• AutoFact: DNA repair and transcription factor XPB1 (ISS) [Ostreococcus tauri] emb|CAL53063.1| DNA repair and transcription factor XPB1 (ISS) [Ostreococcus tauri]
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: protein
|
0.0
|
|
Putative N-terminus
|
|
biog3_v1.0_unigene2279
|
biogeco3 v1.0
|
233
|
|
• AutoFact: Unassigned protein
|
|
|
• Blast2go: unknown [Picea sitchensis]
|
4.09715e-14
|
|
unknown
|
|
biog3_v1.0_unigene3527
|
biogeco3 v1.0
|
477
|
|
• AutoFact: 8-oxoguanine DNA glycosylase [Populus nigra]
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: n-glycosylase dna lyase
|
0.0
|
|
C-terminus
|
|
biog3_v1.0_unigene6264
|
biogeco3 v1.0
|
431
|
|
• AutoFact: pfam08755, YccV-like, Hemimethylated DNA-binding protein YccV like
|
5.0e-30
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: uvrb uvrc motif-containing protein
|
0.0
|
|
Internal
|
|
biog3_v1.0_unigene6453
|
biogeco3 v1.0
|
402
|
|
• AutoFact: DNA repair and transcription factor XPB1 (ISS) [Ostreococcus tauri] emb|CAL53063.1| DNA repair and transcription factor XPB1 (ISS) [Ostreococcus tauri]
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: protein
|
0.0
|
|
Internal
|
|
biog3_v1.0_unigene7896
|
biogeco3 v1.0
|
748
|
|
• AutoFact: pfam08755, YccV-like, Hemimethylated DNA-binding protein YccV like
|
5.0e-30
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: uvrb uvrc motif-containing protein
|
0.0
|
|
C-terminus
|
|
biog3_v1.0_unigene8239
|
biogeco3 v1.0
|
1084
|
|
• AutoFact: transcription initiation factor TFIIH subunit H2 [Arabidopsis thaliana] gb|AAM90909.1|AF499443_1 p44/SSL1-like protein [Arabidopsis thaliana] gb|AAC97995.1| Similar to gb|Z30094 basic transcripion factor 2, 44 kD subunit from Homo sapiens. EST gb|W43325 c
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape).
|
0.0
|
|
• Blast2go: general transcription factor iih subunit 2-like
|
0.0
|
|
Putative N-terminus
|
|
biog3_v1.0_unigene9664
|
biogeco3 v1.0
|
302
|
|
• AutoFact: RecName: Full=ATP-dependent Clp protease ATP-binding subunit clpA homolog CD4B, chloroplastic; Flags: Precursor gb|AAA34161.1| ATP-dependent protease (CD4B) [Solanum lycopersicum]
|
0.0
|
|
• Blast2go: chaperone protein chloroplastic-like
|
0.0
|
|
unknown
|
|
biog3_v1.0_unigene9732
|
biogeco3 v1.0
|
3252
|
|
• AutoFact: ATP-dependent Clp protease ATP-binding subunit clpA homolog CD4B, chloroplastic n=3 Tax=core eudicotyledons RepID=CLPAB_SOLLC
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: chaperone protein chloroplastic-like
|
0.0
|
|
Complete
|
|
biog3_v1.0_unigene10601
|
biogeco3 v1.0
|
421
|
|
• AutoFact: DNA repair and transcription factor XPB1 (ISS) [Ostreococcus tauri] emb|CAL53063.1| DNA repair and transcription factor XPB1 (ISS) [Ostreococcus tauri]
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: protein
|
0.0
|
|
Internal
|
|
biog3_v1.0_unigene11201
|
biogeco3 v1.0
|
790
|
|
• AutoFact: DNA repair and transcription factor XPB1 (ISS) [Ostreococcus tauri] emb|CAL53063.1| DNA repair and transcription factor XPB1 (ISS) [Ostreococcus tauri]
|
0.0
|
|
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis).
|
0.0
|
|
• Blast2go: protein
|
0.0
|
|
C-terminus
|
|
biog3_v1.0_unigene17326
|
biogeco3 v1.0
|
249
|
|
• AutoFact: ultraviolet hypersensitive 1 [Arabidopsis thaliana]
|
3.0e-10
|
|
• FL-Next: Isoform 2 of DNA repair endonuclease UVH1 OS=Arabidopsis thaliana GN=UVH1
|
0.0
|
|
• Blast2go: dna repair endonuclease uvh1
|
8.38969e-13
|
|
Internal
|
|
biog3_v1.0_unigene18005
|
biogeco3 v1.0
|
220
|
|
• AutoFact: DNA repair and transcription factor XPB1 (ISS) [Ostreococcus tauri] emb|CAL53063.1| DNA repair and transcription factor XPB1 (ISS) [Ostreococcus tauri]
|
0.0
|
|
• Blast2go: protein
|
0.0
|
|
unknown
|
|
biog3_v1.0_unigene18618
|
biogeco3 v1.0
|
144
|
|
• AutoFact: 5' repair endonuclease [Arabidopsis thaliana]
|
1.0e-08
|
|
• FL-Next: Isoform 3 of DNA repair endonuclease UVH1 OS=Arabidopsis thaliana GN=UVH1
|
0.0
|
|
• Blast2go: dna repair endonuclease uvh1
|
6.27712e-13
|
|
Internal
|
|
biog3_v1.0_unigene19073
|
biogeco3 v1.0
|
214
|
|
• AutoFact: 5' repair endonuclease [Arabidopsis thaliana]
|
3.00004e-41
|
|
• FL-Next: sp=DNA repair endonuclease UVH1; Arabidopsis thaliana (Mouse-ear cress).
|
0.0
|
|
• Blast2go: dna repair endonuclease uvh1
|
0.0
|
|
Internal
|
|
biog3_v1.0_unigene20199
|
biogeco3 v1.0
|
361
|
|
• AutoFact: 8-oxoguanine DNA glycosylase, putative n=1 Tax=Ricinus communis RepID=B9S2W7_RICCO
|
2.0e-24
|
|
• FL-Next: tr=8-oxoguanine DNA glycosylase, putative; Ricinus communis (Castor bean).
|
0.0
|
|
• Blast2go: n-glycosylase dna lyase
|
7.42815e-29
|
|
Putative C-terminus
|
