Sustainpine_db
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Assembly Name: biogeco3 v1.0

Name: chloroplast thylakoid lumen

Term: GO:0009543  Help

Source: GO from Blast2go

Ontology: Cellular Component


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog3_v1.0_unigene19202 biogeco3 v1.0 215
AutoFact: Photosystem II 11 kDa protein, putative n=1 Tax=Ricinus communis RepID=B9RG39_RICCO 1.0e-38
Blast2go: thylakoid lumenal protein chloroplastic-like 0.0
unknown
biog3_v1.0_unigene19619 biogeco3 v1.0 315
AutoFact: photosystem II protein Psb27 9.99967e-42
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: low psii accumulation 19 protein 0.0
C-terminus
biog3_v1.0_unigene19974 biogeco3 v1.0 225
AutoFact: FKBP-type peptidyl-prolyl cis-trans isomerase 3 [Arabidopsis thaliana] sp|Q9SCY2.2|FKBP3_ARATH RecName: Full=FKBP-type peptidyl-prolyl cis-trans isomerase 3, chloroplastic; Short=PPIase; AltName: Full=AtFKBP13; AltName: Full=FK506-binding protein 1; AltNa 2.0e-40
Blast2go: protein 0.0
unknown
biog3_v1.0_unigene20177 biogeco3 v1.0 246
AutoFact: RecName: Full=Peptidyl-prolyl cis-trans isomerase, chloroplastic; AltName: Full=40 kDa thylakoid lumen PPIase; AltName: Full=40 kDa thylakoid lumen rotamase; Flags: Precursor emb|CAA72792.1| thylakoid lumen rotamase [Spinacia oleracea] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: peptidyl-prolyl cis-trans isomerase chloroplastic-like 0.0
N-terminus
biog3_v1.0_unigene21489 biogeco3 v1.0 511
AutoFact: immunophilin/FKBP-type peptidyl-prolyl cis-trans isomerase-like protein [Oryza sativa Japonica Group] dbj|BAD30608.1| immunophilin/FKBP-type peptidyl-prolyl cis-trans isomerase-like protein [Oryza sativa Japonica Group] gb|EAZ02679.1| hypothetical protein 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Internal
biog3_v1.0_unigene21578 biogeco3 v1.0 215
AutoFact: photosystem II protein Psb27 9.99967e-42
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: low psii accumulation 19 protein 0.0
Internal
biog3_v1.0_unigene21986 biogeco3 v1.0 345
AutoFact: Protease degQ, putative n=1 Tax=Ricinus communis RepID=B9SF71_RICCO 0.0
Blast2go: serine-type peptidase 0.0
Putative coding
biog3_v1.0_unigene22551 biogeco3 v1.0 198
AutoFact: photosystem II stability/assembly factor HCF136 [Arabidopsis thaliana] sp|O82660.1|P2SAF_ARATH RecName: Full=Photosystem II stability/assembly factor HCF136, chloroplastic; Flags: Precursor emb|CAA75723.1| HCF136 protein [Arabidopsis thaliana] dbj|BAB0982 0.0
Blast2go: protein 0.0
unknown
biog3_v1.0_unigene23068 biogeco3 v1.0 477
AutoFact: Os08g0382400 protein n=3 Tax=Oryza sativa RepID=Q6YW78_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: peptidyl-prolyl cis-trans isomerase 0.0
Internal
biog3_v1.0_unigene23440 biogeco3 v1.0 153
AutoFact: photosystem I reaction center subunit III [Vigna radiata] 0.0
Blast2go: protein 0.0
unknown
biog3_v1.0_unigene24786 biogeco3 v1.0 209
AutoFact: UPF0603 protein Os05g0401100, chloroplastic n=3 Tax=Oryza sativa RepID=U603_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain