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Assembly Name: biogeco3 v1.0

Name: response to cold

Term: GO:0009409  Help

Source: GO from Blast2go

Ontology: Biological Process


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog3_v1.0_unigene165 biogeco3 v1.0 738
AutoFact: Putative serine/threonine kinase n=2 Tax=rosids RepID=Q84U32_VITVI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: serine threonine kinase 0.0
Complete
biog3_v1.0_unigene238 biogeco3 v1.0 670
AutoFact: Chloroplast ELIP early light-induced protein n=2 Tax=Vitis vinifera RepID=D6QST4_VITVI 2.00386e-43
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: early light-induced protein 0.0
N-terminus
biog3_v1.0_unigene270 biogeco3 v1.0 898
AutoFact: 3-ketoacyl-CoA synthase n=1 Tax=Vitis vinifera RepID=A5AYN9_VITVI 0.0
FL-Next: sp=3-ketoacyl-CoA synthase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: beta-ketoacyl-coa synthase family protein 0.0
Internal
biog3_v1.0_unigene288 biogeco3 v1.0 659
AutoFact: Unassigned protein
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Putative C-terminus
biog3_v1.0_unigene470 biogeco3 v1.0 419
AutoFact: diacylglycerol kinase [Arabidopsis thaliana] 0.0
FL-Next: sp=Diacylglycerol kinase 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: diacylglycerol kinase 0.0
C-terminus
biog3_v1.0_unigene520 biogeco3 v1.0 809
AutoFact: 3-ketoacyl-CoA synthase n=1 Tax=Vitis vinifera RepID=A5AYN9_VITVI 0.0
FL-Next: sp=3-ketoacyl-CoA synthase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: beta-ketoacyl-coa synthase family protein 0.0
C-terminus
biog3_v1.0_unigene714 biogeco3 v1.0 992
AutoFact: SKP1 interacting partner 4 [Arabidopsis thaliana] sp|Q9M2C9.1|SKIP4_ARATH RecName: Full=F-box/kelch-repeat protein SKIP4; AltName: Full=SKP1-interacting partner 4 emb|CAB71065.1| putative protein [Arabidopsis thaliana] gb|ABF18998.1| At3g61350 [Arabidopsi 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
N-terminus
biog3_v1.0_unigene1049 biogeco3 v1.0 886
AutoFact: Serine/threonine-specific protein kinase, putative n=1 Tax=Ricinus communis RepID=B9S9Z6_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: probable leucine-rich repeat receptor-like serine threonine-protein kinase at5g15730-like 0.0
Internal
biog3_v1.0_unigene1068 biogeco3 v1.0 433
AutoFact: Polcalcin Jun o 2 n=2 Tax=Cupressaceae RepID=POLC2_JUNOX 5.0e-40
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: calcium-binding pollen allergen 0.0
C-terminus
biog3_v1.0_unigene1103 biogeco3 v1.0 294
AutoFact: sulfite reductase [Nicotiana tabacum] dbj|BAA33796.1| sulfite reductase [Nicotiana tabacum] 0.0
FL-Next: tr=Sulfite reductase; Nicotiana tabacum (Common tobacco). 0.0
Blast2go: sulfite reductase 0.0
Internal
biog3_v1.0_unigene1258 biogeco3 v1.0 484
AutoFact: Whole genome shotgun sequence of line PN40024, scaffold_4.assembly12x (Fragment) n=2 Tax=Vitis vinifera RepID=D7SJG4_VITVI 0.0
FL-Next: sp=ABC transporter B family member 25, mitochondrial; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: abc transporter family of the mitochondria family 0.0
N-terminus
biog3_v1.0_unigene1340 biogeco3 v1.0 433
AutoFact: 3-hydroxyisobutyryl-CoA hydrolase 1 [Arabidopsis thaliana] sp|Q9LKJ1.1|HIBC1_ARATH RecName: Full=3-hydroxyisobutyryl-CoA hydrolase 1; AltName: Full=CoA-thioester hydrolase CHY1 gb|AAF77193.1|AF276301_1 CoA-thioester hydrolase CHY1 [Arabidopsis thaliana] d 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 3-hydroxyisobutyryl-coenzyme a expressed 0.0
Internal
biog3_v1.0_unigene1373 biogeco3 v1.0 985
AutoFact: ABC transporter family protein n=1 Tax=Camellia sinensis RepID=F5A834_CAMSI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: abc transporter family protein 0.0
Putative C-terminus
biog3_v1.0_unigene1618 biogeco3 v1.0 1260
AutoFact: SAL1 phosphatase n=5 Tax=Brassicaceae RepID=DPNP1_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 3 (2 ) -bisphosphate nucleotidase 0.0
C-terminus
biog3_v1.0_unigene1769 biogeco3 v1.0 523
AutoFact: Small molecular heat shock protein 10 n=1 Tax=Nelumbo nucifera RepID=A3FPF3_NELNU 2.0e-36
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 10 kda chaperonin 0.0
Complete
biog3_v1.0_unigene1985 biogeco3 v1.0 1198
AutoFact: B-box type zinc finger-containing protein [Arabidopsis thaliana] gb|AAS77483.1| At5g54470 [Arabidopsis thaliana] dbj|BAD94801.1| putative protein [Arabidopsis thaliana] gb|AED96499.1| B-box type zinc finger-containing protein [Arabidopsis thaliana] 2.0e-15
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Complete
biog3_v1.0_unigene2238 biogeco3 v1.0 479
AutoFact: RecName: Full=Phosphoglucomutase, chloroplastic; Short=PGM; AltName: Full=Glucose phosphomutase; Flags: Precursor emb|CAB60128.1| plastidial phosphoglucomutase [Pisum sativum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: phosphoglucomutase 0.0
Internal
biog3_v1.0_unigene2271 biogeco3 v1.0 421
AutoFact: monodehydroascorbate reductase [Spinacia oleracea] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: monodehydroascorbate reductase 0.0
Internal
biog3_v1.0_unigene2485 biogeco3 v1.0 714
AutoFact: calcium-dependent lipid-binding domain-containing protein [Arabidopsis thaliana] gb|AAL06551.1|AF412098_1 AT4g34150/F28A23_90 [Arabidopsis thaliana] gb|AAN31905.1| unknown protein [Arabidopsis thaliana] gb|AAT41866.1| At4g34150 [Arabidopsis thaliana] gb|A 0.0
Blast2go: protein binding 0.0
Coding
biog3_v1.0_unigene2517 biogeco3 v1.0 538
AutoFact: Polcalcin (Fragment) n=4 Tax=Pseudotsuga RepID=C6F9H5_PSEMZ 0.0
FL-Next: sp=Probable calcium-binding protein CML25; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: polcalcin 0.0
Complete

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain