Sustainpine_db
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Assembly Name: biogeco3 v1.0

Name: cytoplasm

Term: GO:0005737  Help

Source: GO from Blast2go

Ontology: Cellular Component


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog3_v1.0_unigene7 biogeco3 v1.0 455
AutoFact: transcription factor Pur-alpha 1 [Arabidopsis thaliana] gb|AAL31888.1|AF419556_1 At2g32080/F22D22.17 [Arabidopsis thaliana] gb|AEC08632.1| transcription factor Pur-alpha 1 [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Internal
biog3_v1.0_unigene25 biogeco3 v1.0 460
AutoFact: Caryophyllene/humulene synthase n=1 Tax=Pinus sylvestris RepID=B4XAK4_PINSY 0.0
FL-Next: tr=Caryophyllene/humulene synthase; Pinus sylvestris (Scots pine). 0.0
Blast2go: longifolene synthase 0.0
Internal
biog3_v1.0_unigene57 biogeco3 v1.0 318
AutoFact: Actin-11 n=180 Tax=Spermatophyta RepID=ACT11_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: actin 0.0
N-terminus
biog3_v1.0_unigene62 biogeco3 v1.0 332
AutoFact: Tubulin beta-4 chain n=11 Tax=Eukaryota RepID=TBB4_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: beta chain 0.0
Internal
biog3_v1.0_unigene63 biogeco3 v1.0 1154
AutoFact: glucan endo-1,3-beta-glucosidase 11 [Arabidopsis thaliana] sp|Q8L868.1|E1311_ARATH RecName: Full=Glucan endo-1,3-beta-glucosidase 11; AltName: Full=(1->3)-beta-glucan endohydrolase 11; Short=(1->3)-beta-glucanase 11; AltName: Full=Beta-1,3-endoglucanase 1 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
N-terminus
biog3_v1.0_unigene165 biogeco3 v1.0 738
AutoFact: Putative serine/threonine kinase n=2 Tax=rosids RepID=Q84U32_VITVI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: serine threonine kinase 0.0
Complete
biog3_v1.0_unigene175 biogeco3 v1.0 323
AutoFact: RecName: Full=Ribonucleoside-diphosphate reductase small chain; AltName: Full=Ribonucleoside-diphosphate reductase R2 subunit; AltName: Full=Ribonucleotide reductase small subunit emb|CAA63194.1| ribonucleotide reductase R2 [Nicotiana tabacum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ribonucleotide reductase small subunit 0.0
Internal
biog3_v1.0_unigene201 biogeco3 v1.0 519
AutoFact: replication licensing factor MCM7 homologue [Zea mays] emb|CAC44902.1| replication licensing factor MCM7 homologue [Zea mays] 0.0
FL-Next: sp=Protein PROLIFERA; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: protein prolifera 0.0
N-terminus
biog3_v1.0_unigene205 biogeco3 v1.0 161
AutoFact: putative GMP synthase [Arabidopsis thaliana] 0.0
FL-Next: tr=GMP synthase, putative; Ricinus communis (Castor bean). 0.0
Blast2go: gmp synthase 0.0
Internal
biog3_v1.0_unigene221 biogeco3 v1.0 724
AutoFact: leucyl-tRNA synthetase [Arabidopsis thaliana] gb|AEE28469.1| leucyl-tRNA synthetase [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
N-terminus
biog3_v1.0_unigene235 biogeco3 v1.0 496
AutoFact: actin-related protein 5 [Arabidopsis thaliana] sp|Q940Z2.2|ARP5_ARATH RecName: Full=Actin-related protein 5 dbj|BAB03145.1| actin-like protein [Arabidopsis thaliana] gb|ACV53017.1| actin-related protein 5 [Arabidopsis thaliana] gb|ACV53018.1| actin-relate 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: actin-related protein 5 0.0
Complete
biog3_v1.0_unigene260 biogeco3 v1.0 402
AutoFact: [L] COG1241 Predicted ATPase involved in replication control, Cdc46/Mcm family 1.0e-37
FL-Next: tr=Os02g0797400 protein; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: at2g07360-like protein 0.0
Putative N-terminus
biog3_v1.0_unigene312 biogeco3 v1.0 275
AutoFact: pfam04146, YTH, YT521-B-like domain 0.0
Blast2go: uncharacterized protein 0.0
Coding
biog3_v1.0_unigene415 biogeco3 v1.0 413
AutoFact: Protein arginine n-methyltransferase, putative n=1 Tax=Ricinus communis RepID=B9RGH9_RICCO 0.0
Blast2go: protein arginine n-methyltransferase 6 0.0
unknown
biog3_v1.0_unigene534 biogeco3 v1.0 2125
AutoFact: eukaryotic translation initiation factor 5 [Zea mays] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: eukaryotic translation initiation factor 5 0.0
Complete
biog3_v1.0_unigene573 biogeco3 v1.0 402
AutoFact: contains similarity to human PCF11p homolog (GB:AF046935) [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Ricinus communis (Castor bean). 0.0
Blast2go: protein 0.0
C-terminus
biog3_v1.0_unigene619 biogeco3 v1.0 1173
AutoFact: sucrose-phosphatase 1 [Ginkgo biloba] 0.0
FL-Next: tr=Sucrose-phosphatase; Pinus taeda (Loblolly pine). 0.0
Blast2go: sucrose-phosphatase 2 0.0
C-terminus
biog3_v1.0_unigene624 biogeco3 v1.0 1793
AutoFact: programmed cell death 2 C-terminal domain-containing protein [Arabidopsis thaliana] gb|AAL06544.1|AF412091_1 AT5g64830/MXK3_5 [Arabidopsis thaliana] dbj|BAA97295.1| unnamed protein product [Arabidopsis thaliana] gb|ABG48386.1| At5g64830 [Arabidopsis thali 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: programmed cell death 2 c-terminal domain-containing protein 0.0
Putative Complete
biog3_v1.0_unigene725 biogeco3 v1.0 633
AutoFact: Nucleosome assembly protein family n=1 Tax=Physcomitrella patens subsp. patens RepID=A9TVZ4_PHYPA 0.0
FL-Next: tr=Nucleosome assembly protein family; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: nucleosome assembly protein 1 2 0.0
N-terminus
biog3_v1.0_unigene753 biogeco3 v1.0 708
AutoFact: actin-related protein C1B [Arabidopsis thaliana] gb|AAL27513.1|AF439845_1 At2g31300/F16D14.14 [Arabidopsis thaliana] gb|AAD20675.1| putative ARP2/3 protein complex subunit p41 [Arabidopsis thaliana] gb|AAN18136.1| At2g31300/F16D14.14 [Arabidopsis thaliana 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: actin-related protein c1a 0.0
N-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain