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Assembly Name: biogeco3 v1.0

Name: GTP binding

Term: GO:0005525  Help

Source: GO from Blast2go

Ontology: Molecular Function


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog3_v1.0_unigene2613 biogeco3 v1.0 1287
AutoFact: putative nuclear GTPase [Solanum lycopersicum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: guanine nucleotide-binding 3 homolog 0.0
Internal
biog3_v1.0_unigene2641 biogeco3 v1.0 343
AutoFact: ADP-ribosylation factor-like A1D [Arabidopsis thaliana] gb|AAK96715.1| ADP-ribosylation factor-like protein [Arabidopsis thaliana] gb|AAL47331.1| ADP-ribosylation factor-like protein [Arabidopsis thaliana] gb|AAM65030.1| ADP-ribosylation factor-like prote 0.0
Blast2go: adp-ribosylation factor-like protein 0.0
Putative coding
biog3_v1.0_unigene2911 biogeco3 v1.0 468
AutoFact: Cell division protein ftsZ, putative n=1 Tax=Ricinus communis RepID=B9SRX2_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: plastid division protein 0.0
Internal
biog3_v1.0_unigene3022 biogeco3 v1.0 304
AutoFact: U5 small nuclear ribonucleoprotein component [Arabidopsis thaliana] ref|NP_849600.1| U5 small nuclear ribonucleoprotein component [Arabidopsis thaliana] gb|AAF80219.1|AC025290_8 Contains similarity to an U5 snRNP-specific protein 116 kD from Homo sapiens 0.0
Blast2go: u5 small nuclear ribonucleoprotein component 0.0
unknown
biog3_v1.0_unigene3561 biogeco3 v1.0 435
AutoFact: Elongation factor-like protein n=7 Tax=Arabidopsis RepID=F4IPW5_ARATH 0.0
FL-Next: sp=Elongation factor Tu, plastid; Prototheca wickerhamii. Plastid; Non-photosynthetic plastid. 0.0
Blast2go: elongation factor-like protein 0.0
Internal
biog3_v1.0_unigene3991 biogeco3 v1.0 319
AutoFact: putative GTP-binding protein [Oryza sativa Japonica Group] gb|ABF98531.1| Dynamin-related protein 1C, putative, expressed [Oryza sativa Japonica Group] dbj|BAH01687.1| unnamed protein product [Oryza sativa Japonica Group] gb|EEC76063.1| hypothetical prote 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Internal
biog3_v1.0_unigene4099 biogeco3 v1.0 1443
AutoFact: dynamin-related protein 1E [Arabidopsis thaliana] sp|Q9FNX5.1|DRP1E_ARATH RecName: Full=Dynamin-related protein 1E; AltName: Full=Dynamin-like protein 4; AltName: Full=Dynamin-like protein DLP2; AltName: Full=Dynamin-like protein E gb|AAL16262.1|AF428332_ 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dynamin-related protein 1e-like isoform 1 0.0
C-terminus
biog3_v1.0_unigene4114 biogeco3 v1.0 306
AutoFact: Translocase of chloroplast 120, chloroplastic n=1 Tax=Arabidopsis thaliana RepID=TC120_ARATH 0.0
Blast2go: protein 0.0
Coding
biog3_v1.0_unigene4171 biogeco3 v1.0 993
AutoFact: GTP-binding protein, putative n=1 Tax=Ricinus communis RepID=B9RI48_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: gtp-binding protein 0.0
C-terminus
biog3_v1.0_unigene4186 biogeco3 v1.0 530
AutoFact: U5 small nuclear ribonucleoprotein component [Arabidopsis thaliana] ref|NP_849600.1| U5 small nuclear ribonucleoprotein component [Arabidopsis thaliana] gb|AAF80219.1|AC025290_8 Contains similarity to an U5 snRNP-specific protein 116 kD from Homo sapiens 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: u5 small nuclear ribonucleoprotein component 0.0
N-terminus
biog3_v1.0_unigene4342 biogeco3 v1.0 336
AutoFact: Dynamin family protein n=1 Tax=Musa balbisiana RepID=Q1EP28_MUSBA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dynamin-like protein c-like 0.0
Internal
biog3_v1.0_unigene4352 biogeco3 v1.0 285
AutoFact: PREDICTED: similar to guanine nucleotide regulatory protein n=1 Tax=Vitis vinifera RepID=UPI0001985FCE 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: ras-related protein raba5a-like 0.0
C-terminus
biog3_v1.0_unigene4382 biogeco3 v1.0 442
AutoFact: Translation elongation factor G, putative n=1 Tax=Ricinus communis RepID=B9RBP7_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: elongation factor chloroplastic-like 0.0
C-terminus
biog3_v1.0_unigene4385 biogeco3 v1.0 910
AutoFact: Rab2/RabB-family small GTPase n=4 Tax=Physcomitrella patens subsp. patens RepID=A9SC62_PHYPA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rab2 -family small gtpase 0.0
Complete
biog3_v1.0_unigene4389 biogeco3 v1.0 1790
AutoFact: GTP binding protein, putative n=1 Tax=Ricinus communis RepID=B9SRI2_RICCO 0.0
FL-Next: sp=Dynamin-like protein ARC5; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: gtp binding 0.0
C-terminus
biog3_v1.0_unigene4799 biogeco3 v1.0 252
AutoFact: GTP binding protein, putative n=1 Tax=Ricinus communis RepID=B9SRI2_RICCO 0.0
FL-Next: Isoform 2 of Dynamin-like protein ARC5 OS=Arabidopsis thaliana GN=ARC5 0.0
Blast2go: gtp binding 0.0
Internal
biog3_v1.0_unigene4956 biogeco3 v1.0 396
AutoFact: FtsZ-like protein n=2 Tax=Nicotiana tabacum RepID=Q95DV5_TOBAC 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: plastid division protein 0.0
Putative C-terminus
biog3_v1.0_unigene4966 biogeco3 v1.0 436
AutoFact: dynamin-related protein 3A [Arabidopsis thaliana] sp|Q8S944.2|DRP3A_ARATH RecName: Full=Dynamin-related protein 3A; AltName: Full=Dynamin-like protein 2; AltName: Full=Dynamin-like protein 2a emb|CAA20578.1| Arabidopsis dynamin-like protein ADL2 [Arabidop 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dynamin-related protein 3a-like 0.0
Internal
biog3_v1.0_unigene4979 biogeco3 v1.0 917
AutoFact: GTPase Rab1 n=3 Tax=Pinaceae RepID=B0LXL9_9CONI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rab family gtpase 0.0
Complete
biog3_v1.0_unigene4989 biogeco3 v1.0 851
AutoFact: translation initiation factor eIF-2 gamma subunit [Arabidopsis thaliana] gb|AAK29674.1|AF353097_1 protein synthesis initiation factor eIF2 gamma [Arabidopsis thaliana] gb|AAC16745.1| Strong similarity to initiation factor eIF-2, gb|U37354 from S. pombe. E 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: eukaryotic translation initiation factor 2 subunit 3 0.0
C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain