Sustainpine_db
HomeAssembliesBLASTSearchInstitutions

Assembly Name: biogeco3 v1.0

Name: RNA polymerase II transcription factor activity

Term: GO:0003702  Help

Source: GO from Blast2go

Ontology: Molecular Function

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
biog3_v1.0_unigene53 biogeco3 v1.0 1053
• AutoFact: TATA-box binding protein [Phaseolus vulgaris] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: tata-binding protein 0.0
Complete
biog3_v1.0_unigene4309 biogeco3 v1.0 246
• AutoFact: Protein phosphatase 2a, regulatory subunit, putative n=1 Tax=Ricinus communis RepID=B9SH46_RICCO 0.0
• FL-Next: sp=Serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' beta isoform; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: protein 0.0
Putative C-terminus
biog3_v1.0_unigene4361 biogeco3 v1.0 635
• AutoFact: TBP-associated factor 13 n=1 Tax=Solanum melongena RepID=F4YY46_SOLME 0.0
• FL-Next: tr=TBP-associated factor 13; Solanum melongena (Eggplant) (Aubergine). 0.0
• Blast2go: transcription factor tfiid 0.0
Putative Complete
biog3_v1.0_unigene4667 biogeco3 v1.0 887
• AutoFact: transcription initiation factor TFIIE alpha subunit [Arabidopsis thaliana] gb|AAL07078.1| unknown protein [Arabidopsis thaliana] gb|AAM20302.1| unknown protein [Arabidopsis thaliana] gb|AAR28007.1| TFIIE-alpha 1 [Arabidopsis thaliana] gb|AEE27553.1| trans 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: general transcription factor iie subunit 1-like 0.0
N-terminus
biog3_v1.0_unigene4731 biogeco3 v1.0 411
• AutoFact: RecName: Full=Acetylornithine aminotransferase, mitochondrial; Short=ACOAT; AltName: Full=Acetylornithine transaminase; Short=AOTA; Flags: Precursor emb|CAA69936.1| acetylornithine aminotransferase [Alnus glutinosa] 0.0
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Blast2go: protein 0.0
N-terminus
biog3_v1.0_unigene5656 biogeco3 v1.0 423
• AutoFact: flag-tagged protein kinase domain of putative mitogen-activated protein kinase kinase kinase [synthetic construct] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: serine threonine-protein kinase ht1-like 0.0
N-terminus
biog3_v1.0_unigene5782 biogeco3 v1.0 438
• AutoFact: RecName: Full=Acetylornithine aminotransferase, mitochondrial; Short=ACOAT; AltName: Full=Acetylornithine transaminase; Short=AOTA; Flags: Precursor emb|CAA69936.1| acetylornithine aminotransferase [Alnus glutinosa] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: protein 0.0
Internal
biog3_v1.0_unigene7288 biogeco3 v1.0 465
• AutoFact: putative transcription initiation factor IIF beta subunit [Oryza sativa Japonica Group] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: transcription initiation factor iif subunit 0.0
C-terminus
biog3_v1.0_unigene10258 biogeco3 v1.0 312
• AutoFact: transcription initiation factor TFIIE alpha subunit [Arabidopsis thaliana] gb|AAL07078.1| unknown protein [Arabidopsis thaliana] gb|AAM20302.1| unknown protein [Arabidopsis thaliana] gb|AAR28007.1| TFIIE-alpha 1 [Arabidopsis thaliana] gb|AEE27553.1| trans 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: general transcription factor iie subunit 1-like 0.0
Internal
biog3_v1.0_unigene10774 biogeco3 v1.0 452
• AutoFact: RecName: Full=Acetylornithine aminotransferase, mitochondrial; Short=ACOAT; AltName: Full=Acetylornithine transaminase; Short=AOTA; Flags: Precursor emb|CAA69936.1| acetylornithine aminotransferase [Alnus glutinosa] 0.0
• FL-Next: tr=Ornithine aminotransferase; Pinus sylvestris (Scots pine). 0.0
• Blast2go: protein 0.0
Internal
biog3_v1.0_unigene13139 biogeco3 v1.0 380
• AutoFact: putative transcription initiation factor IIF beta subunit [Oryza sativa Japonica Group] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: transcription initiation factor iif subunit 0.0
Internal
biog3_v1.0_unigene13284 biogeco3 v1.0 382
• AutoFact: Protein phosphatase 2a, regulatory subunit, putative n=1 Tax=Ricinus communis RepID=B9SH46_RICCO 0.0
• FL-Next: sp=Serine/threonine protein phosphatase 2A 59 kDa regulatory subunit B' gamma isoform; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: protein 0.0
Internal
biog3_v1.0_unigene20977 biogeco3 v1.0 277
• AutoFact: Protein phosphatase 2a, regulatory subunit, putative n=1 Tax=Ricinus communis RepID=B9SH46_RICCO 0.0
• FL-Next: sp=Serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' theta isoform; Arabidopsis thaliana (Mouse-ear cress). 0.0
• Blast2go: protein 0.0
Internal
biog3_v1.0_unigene21850 biogeco3 v1.0 245
• AutoFact: flag-tagged protein kinase domain of putative mitogen-activated protein kinase kinase kinase [synthetic construct] 0.0
• Blast2go: protein 0.0
unknown
biog3_v1.0_unigene23712 biogeco3 v1.0 371
• AutoFact: flag-tagged protein kinase domain of putative mitogen-activated protein kinase kinase kinase [synthetic construct] 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: serine threonine-protein kinase ht1-like 0.0
Putative C-terminus
biog3_v1.0_unigene24753 biogeco3 v1.0 651
• AutoFact: transcription initiation factor TFIIE alpha subunit [Arabidopsis thaliana] gb|AAL07078.1| unknown protein [Arabidopsis thaliana] gb|AAM20302.1| unknown protein [Arabidopsis thaliana] gb|AAR28007.1| TFIIE-alpha 1 [Arabidopsis thaliana] gb|AEE27553.1| trans 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: general transcription factor iie subunit 1-like 0.0
Internal

Go to Annotations List

Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain