Sustainpine_db
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Assembly Name: biogeco3 v1.0

Name: ER to Golgi vesicle-mediated transport

Term: GO:0006888  Help

Source: GO from Blast2go

Ontology: Biological Process


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog3_v1.0_unigene15251 biogeco3 v1.0 310
AutoFact: protein transport protein SEC23 [Arabidopsis thaliana] dbj|BAB02785.1| protein transport protein Sec23 [Arabidopsis thaliana] gb|AAO22730.1| putative transport protein [Arabidopsis thaliana] gb|AAO50656.1| putative transport protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: protein transport protein sec23 0.0
Internal
biog3_v1.0_unigene18027 biogeco3 v1.0 239
AutoFact: sec23/sec24-like transport protein [Arabidopsis thaliana] gb|AAO29951.1| Unknown protein [Arabidopsis thaliana] gb|AAQ56793.1| At5g43670 [Arabidopsis thaliana] gb|AED94993.1| sec23/sec24-like transport protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: protein transport protein sec23 0.0
Internal
biog3_v1.0_unigene18591 biogeco3 v1.0 213
AutoFact: Rab2/RabB-family small GTPase n=4 Tax=Physcomitrella patens subsp. patens RepID=A9SC62_PHYPA 0.0
Blast2go: rab2 -family small gtpase 0.0
unknown
biog3_v1.0_unigene18595 biogeco3 v1.0 147
AutoFact: Golgi SNARE 12 protein n=4 Tax=Arabidopsis RepID=GOS12_ARATH 0.0
Blast2go: golgi snare 12 protein 0.0
unknown
biog3_v1.0_unigene19387 biogeco3 v1.0 159
AutoFact: RINT-1 / TIP-1 domain-containing MAG2 protein [Arabidopsis thaliana] emb|CAB41853.1| putative protein [Arabidopsis thaliana] gb|AEE78320.1| RINT-1 / TIP-1 domain-containing MAG2 protein [Arabidopsis thaliana] 9.0e-35
FL-Next: tr=Putative uncharacterized protein; Selaginella moellendorffii (Spikemoss). 0.0
Blast2go: rad50-interacting protein 4.12458e-41
Internal
biog3_v1.0_unigene20123 biogeco3 v1.0 223
AutoFact: Coatomer alpha subunit n=1 Tax=Hordeum vulgare subsp. vulgare RepID=Q6RYF4_HORVD 0.0
Blast2go: coatomer alpha 0.0
Putative coding
biog3_v1.0_unigene20683 biogeco3 v1.0 316
AutoFact: Protein SEY1, putative n=1 Tax=Ricinus communis RepID=B9SN36_RICCO 0.0
Blast2go: protein root hair defective 3 homolog 1-like 0.0
unknown
biog3_v1.0_unigene21534 biogeco3 v1.0 352
AutoFact: RINT-1 / TIP-1 domain-containing MAG2 protein [Arabidopsis thaliana] emb|CAB41853.1| putative protein [Arabidopsis thaliana] gb|AEE78320.1| RINT-1 / TIP-1 domain-containing MAG2 protein [Arabidopsis thaliana] 9.0e-35
FL-Next: tr=Putative uncharacterized protein; Ricinus communis (Castor bean). 0.0
Blast2go: rad50-interacting protein 4.12458e-41
Internal
biog3_v1.0_unigene23036 biogeco3 v1.0 343
AutoFact: Ras-related protein Rab-2-B n=15 Tax=Magnoliophyta RepID=RAB2B_MAIZE 0.0
Blast2go: ras-related protein rab-2-a 0.0
unknown
biog3_v1.0_unigene23956 biogeco3 v1.0 144
AutoFact: Protein transport protein sec23, putative n=1 Tax=Ricinus communis RepID=B9SKJ9_RICCO 0.0
FL-Next: tr=Protein transport protein sec23, putative; Ricinus communis (Castor bean). 0.0
Blast2go: protein transport protein 0.0
Internal
biog3_v1.0_unigene25567 biogeco3 v1.0 214
AutoFact: protein transport protein SEC23 [Arabidopsis thaliana] dbj|BAB02785.1| protein transport protein Sec23 [Arabidopsis thaliana] gb|AAO22730.1| putative transport protein [Arabidopsis thaliana] gb|AAO50656.1| putative transport protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: protein transport protein sec23 0.0
N-terminus
biog3_v1.0_unigene25755 biogeco3 v1.0 423
AutoFact: Coatomer alpha subunit n=1 Tax=Hordeum vulgare subsp. vulgare RepID=Q6RYF4_HORVD 0.0
FL-Next: sp=Coatomer subunit alpha-1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: coatomer alpha 0.0
Internal
biog3_v1.0_unigene26079 biogeco3 v1.0 396
AutoFact: vesicle-associated membrane protein 722 [Arabidopsis thaliana] sp|P47192.2|VA722_ARATH RecName: Full=Vesicle-associated membrane protein 722; Short=AtVAMP722; AltName: Full=Synaptobrevin-related protein 1 gb|AAL31896.1|AF419564_1 At2g33120/F25I18.14 [Arab 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: vesicle-associated membrane synaptobrevin 7b 0.0
N-terminus
biog3_v1.0_unigene26182 biogeco3 v1.0 279
AutoFact: Coatomer alpha subunit n=1 Tax=Hordeum vulgare subsp. vulgare RepID=Q6RYF4_HORVD 0.0
FL-Next: sp=Coatomer subunit alpha-3; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: coatomer alpha 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain