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Assembly Name: biogeco3 v1.0

Name: vacuole

Term: GO:0005773  Help

Source: GO from Blast2go

Ontology: Cellular Component


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog3_v1.0_unigene2265 biogeco3 v1.0 509
AutoFact: WS03730.C21_E19 SS-B-N-22 Picea sitchensis cDNA clone WS03730_E19 3', mRNA sequence. 0.0
FL-Next: sp=Uncharacterized protein At3g06530; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: u3 small nucleolar rna-associated protein 10 and nuc211 domain-containing protein 0.0
Internal
biog3_v1.0_unigene2314 biogeco3 v1.0 1021
AutoFact: 60S ribosomal protein L11-1 n=51 Tax=Embryophyta RepID=RL111_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: 60s ribosomal protein l11 0.0
Complete
biog3_v1.0_unigene2411 biogeco3 v1.0 1055
AutoFact: DEAD-box ATP-dependent RNA helicase 40 [Arabidopsis thaliana] sp|Q9SQV1.1|RH40_ARATH RecName: Full=DEAD-box ATP-dependent RNA helicase 40 gb|AAF08584.1|AC011623_17 putative RNA helicase [Arabidopsis thaliana] gb|AEE74400.1| DEAD-box ATP-dependent RNA heli 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: dead-box atp-dependent rna helicase 14 0.0
Internal
biog3_v1.0_unigene2433 biogeco3 v1.0 299
AutoFact: Putative synaptobrevin-like protein [Oryza sativa Japonica Group] 0.0
Blast2go: vesicle-associated membrane protein 714 0.0
unknown
biog3_v1.0_unigene2473 biogeco3 v1.0 417
AutoFact: calcineurin-like protein [Eucalyptus grandis] gb|AAL25650.1|AF197334_1 calcineurin-like protein [Eucalyptus camaldulensis] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: calcineurin subunit b 0.0
N-terminus
biog3_v1.0_unigene2553 biogeco3 v1.0 434
AutoFact: vacuolar-sorting receptor 4 [Arabidopsis thaliana] ref|NP_849954.1| vacuolar-sorting receptor 4 [Arabidopsis thaliana] sp|Q56ZQ3.2|VSR4_ARATH RecName: Full=Vacuolar-sorting receptor 4; Short=AtVSR4; AltName: Full=BP80-like protein a; Short=AtBP80a; AltNam 0.0
Blast2go: vacuolar sorting receptor 0.0
unknown
biog3_v1.0_unigene2619 biogeco3 v1.0 323
AutoFact: RecName: Full=tRNA-dihydrouridine synthase 3-like; AltName: Full=Zinc finger CCCH domain-containing protein 50; Short=AtC3H50 emb|CAB38623.1| putative protein [Arabidopsis thaliana] emb|CAB80552.1| putative protein [Arabidopsis thaliana] 0.0
FL-Next: sp=tRNA-dihydrouridine synthase 3-like; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: trna-dihydrouridine synthase 3-like 0.0
Internal
biog3_v1.0_unigene2694 biogeco3 v1.0 259
AutoFact: abhydrolase domain-containing protein 13 [Danio rerio] sp|Q32LS6.1|ABHDD_DANRE RecName: Full=Abhydrolase domain-containing protein 13 gb|AAI09446.1| Zgc:123286 [Danio rerio] 2.8026e-45
Blast2go: protein 0.0
unknown
biog3_v1.0_unigene2706 biogeco3 v1.0 887
AutoFact: FK506 binding-like protein n=5 Tax=Picea sitchensis RepID=A9P2H9_PICSI 0.0
FL-Next: tr=FK506 binding-like protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: fk506 binding-like protein 0.0
Complete
biog3_v1.0_unigene2748 biogeco3 v1.0 312
AutoFact: Phospholipase A2-like protein (Fragment) n=4 Tax=Picea sitchensis RepID=E0Z878_PICSI 6.0e-24
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: phospholipase a2-like protein 0.0
C-terminus
biog3_v1.0_unigene3029 biogeco3 v1.0 620
AutoFact: Alpha-L-arabinofuranosidase n=2 Tax=Fragaria x ananassa RepID=B3F8C4_FRAAN 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: alpha-l-arabinofuranosidase 0.0
Internal
biog3_v1.0_unigene3073 biogeco3 v1.0 418
AutoFact: Magnesium transporter n=3 Tax=Malpighiales RepID=B9GVM0_POPTR 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: magnesium transporter mrs2-1 0.0
Internal
biog3_v1.0_unigene3075 biogeco3 v1.0 715
AutoFact: pfam01370, Epimerase, NAD dependent epimerase/dehydratase family 4.0e-20
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rna binding protein 0.0
C-terminus
biog3_v1.0_unigene3192 biogeco3 v1.0 317
AutoFact: F1F0-ATPase inhibitor protein [Arabidopsis thaliana] 2.0e-08
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: f1f0-atpase inhibitor protein 1.83481e-39
C-terminus
biog3_v1.0_unigene3405 biogeco3 v1.0 307
AutoFact: nudix hydrolase 3 [Arabidopsis thaliana] sp|Q8L831.1|NUDT3_ARATH RecName: Full=Nudix hydrolase 3; Short=AtNUDT3 gb|AAM53332.1| unknown protein [Arabidopsis thaliana] gb|AAN15461.1| unknown protein [Arabidopsis thaliana] gb|AEE36287.1| nudix hydrolase 3 [A 0.0
FL-Next: sp=Nudix hydrolase 3; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: nudix hydrolase 3-like 0.0
Internal
biog3_v1.0_unigene3462 biogeco3 v1.0 226
AutoFact: serine carboxypeptidase-like 26 [Arabidopsis thaliana] sp|Q9ZQQ0.1|SCP26_ARATH RecName: Full=Serine carboxypeptidase-like 26; Flags: Precursor gb|AAD21479.1| putative serine carboxypeptidase II [Arabidopsis thaliana] gb|AAM15111.1| putative serine carboxy 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: serine carboxypeptidase-like protein 0.0
Internal
biog3_v1.0_unigene3481 biogeco3 v1.0 2042
AutoFact: glycosyl hydrolase family-like protein [Salvia miltiorrhiza] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: alpha-galactosidase 0.0
Complete
biog3_v1.0_unigene3499 biogeco3 v1.0 273
AutoFact: Polygalacturonase, putative n=1 Tax=Ricinus communis RepID=B9TA63_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: probable polygalacturonase-like 0.0
Internal
biog3_v1.0_unigene3583 biogeco3 v1.0 243
AutoFact: Rubber elongation factor protein, putative n=1 Tax=Ricinus communis RepID=B9RFA8_RICCO 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rubber elongation factor 0.0
N-terminus
biog3_v1.0_unigene3654 biogeco3 v1.0 790
AutoFact: Rab2/RabB-family small GTPase n=4 Tax=Physcomitrella patens subsp. patens RepID=A9SC62_PHYPA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: rab2 -family small gtpase 0.0
Putative C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain