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Assembly Name: biogeco3 v1.0

Name: carbohydrate metabolic process

Term: GO:0005975  Help

Source: GO from Blast2go

Ontology: Biological Process


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog3_v1.0_unigene16 biogeco3 v1.0 471
AutoFact: Phosphorylase n=1 Tax=Populus trichocarpa RepID=B9H0D3_POPTR 0.0
FL-Next: sp=Alpha-1,4 glucan phosphorylase L isozyme, chloroplastic/amyloplastic; Ipomoea batatas (Sweet potato) (Convolvulus batatas). 0.0
Blast2go: alpha- glucan phosphorylase l chloroplastic amyloplastic-like 0.0
Internal
biog3_v1.0_unigene63 biogeco3 v1.0 1154
AutoFact: glucan endo-1,3-beta-glucosidase 11 [Arabidopsis thaliana] sp|Q8L868.1|E1311_ARATH RecName: Full=Glucan endo-1,3-beta-glucosidase 11; AltName: Full=(1->3)-beta-glucan endohydrolase 11; Short=(1->3)-beta-glucanase 11; AltName: Full=Beta-1,3-endoglucanase 1 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
N-terminus
biog3_v1.0_unigene146 biogeco3 v1.0 152
AutoFact: DUF822 domain containing protein 5.0e-32
Blast2go: protein 0.0
unknown
biog3_v1.0_unigene233 biogeco3 v1.0 730
AutoFact: putative glycosyl hydrolase [Oryza sativa Japonica Group] dbj|BAD03265.1| putative glycosyl hydrolase [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: glucan endo- -beta-glucosidase 0.0
C-terminus
biog3_v1.0_unigene387 biogeco3 v1.0 563
AutoFact: glucan endo-1,3-beta-glucosidase 13 [Arabidopsis thaliana] sp|Q9FJU9.1|E1313_ARATH RecName: Full=Glucan endo-1,3-beta-glucosidase 13; AltName: Full=(1->3)-beta-glucan endohydrolase 13; Short=(1->3)-beta-glucanase 13; AltName: Full=Beta-1,3-endoglucanase 1 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: glucan endo- -beta-glucosidase 0.0
Putative Complete
biog3_v1.0_unigene549 biogeco3 v1.0 702
AutoFact: mannan endo-1,4-beta-mannosidase 2 [Arabidopsis thaliana] sp|Q7Y223.1|MAN2_ARATH RecName: Full=Mannan endo-1,4-beta-mannosidase 2; AltName: Full=Beta-mannanase 2; AltName: Full=Endo-beta-1,4-mannanase 2; Short=AtMAN2; Flags: Precursor gb|AAP40422.1| putat 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: mannan endo- -beta-mannosidase 2-like 0.0
Putative C-terminus
biog3_v1.0_unigene689 biogeco3 v1.0 983
AutoFact: DUF822 domain containing protein 5.0e-32
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Complete
biog3_v1.0_unigene884 biogeco3 v1.0 387
AutoFact: Glycosyl hydrolase family 38 protein [Arabidopsis thaliana] ref|NP_851037.2| Glycosyl hydrolase family 38 protein [Arabidopsis thaliana] gb|AAM20555.1| alpha-mannosidase [Arabidopsis thaliana] gb|AAN15620.1| alpha-mannosidase [Arabidopsis thaliana] gb|AED 0.0
FL-Next: tr=Predicted protein; Physcomitrella patens subsp. patens (Moss). 0.0
Blast2go: lysosomal alpha-mannosidase 0.0
Internal
biog3_v1.0_unigene1054 biogeco3 v1.0 508
AutoFact: alpha-galactosidase [Helianthus annuus] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: alpha-galactosidase alpha-n- 0.0
C-terminus
biog3_v1.0_unigene1593 biogeco3 v1.0 743
AutoFact: Phosphorylase n=1 Tax=Ricinus communis RepID=B9S366_RICCO 0.0
FL-Next: sp=Alpha-glucan phosphorylase, H isozyme; Triticum aestivum (Wheat). 0.0
Blast2go: alpha-glucan h isozyme-like 0.0
Internal
biog3_v1.0_unigene1795 biogeco3 v1.0 1167
AutoFact: glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family protein [Arabidopsis thaliana] emb|CAA23048.1| putative polygalacturonase [Arabidopsis thaliana] emb|CAB81300.1| putative polygalacturonase [Arabidopsis thaliana] gb|AAL32775.1| 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: glycoside hydrolase family 28 protein 0.0
Internal
biog3_v1.0_unigene2185 biogeco3 v1.0 340
AutoFact: Phosphorylase n=1 Tax=Populus trichocarpa RepID=B9H0D3_POPTR 0.0
FL-Next: sp=Alpha-1,4 glucan phosphorylase L-1 isozyme, chloroplastic/amyloplastic; Solanum tuberosum (Potato). 0.0
Blast2go: alpha- glucan phosphorylase l chloroplastic amyloplastic-like 0.0
Internal
biog3_v1.0_unigene2391 biogeco3 v1.0 3211
AutoFact: Beta-galactosidase n=1 Tax=Picea sitchensis RepID=B8LLU8_PICSI 0.0
FL-Next: sp=Beta-galactosidase; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: beta-galactosidase 3 0.0
Complete
biog3_v1.0_unigene2675 biogeco3 v1.0 445
AutoFact: putative 1,3-beta glucanase [Oryza sativa Japonica Group] dbj|BAD10703.1| putative 1,3-beta glucanase [Oryza sativa Japonica Group] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: glucan -beta-glucosidase 0.0
Internal
biog3_v1.0_unigene2723 biogeco3 v1.0 1414
AutoFact: UDP-D-glucuronate 4-epimerase 1 [Arabidopsis thaliana] ref|XP_002867348.1| UDP-D-glucuronate 4-epimerase 1 [Arabidopsis lyrata subsp. lyrata] sp|Q9M0B6.1|GAE1_ARATH RecName: Full=UDP-glucuronate 4-epimerase 1; AltName: Full=UDP-glucuronic acid epimerase 1 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Complete
biog3_v1.0_unigene2953 biogeco3 v1.0 662
AutoFact: beta-galactosidase [Arabidopsis thaliana] gb|AAM10327.1| At3g54435 [Arabidopsis thaliana] gb|AEE79230.1| beta-galactosidase [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: beta-galactosidase 0.0
N-terminus
biog3_v1.0_unigene3274 biogeco3 v1.0 1069
AutoFact: Alpha-amylase n=2 Tax=Hordeum vulgare subsp. vulgare RepID=C3W8N1_HORVD 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: alpha-amylase-like 2 0.0
Internal
biog3_v1.0_unigene3280 biogeco3 v1.0 389
AutoFact: Alpha-amylase n=2 Tax=Hordeum vulgare subsp. vulgare RepID=C3W8N1_HORVD 0.0
Blast2go: alpha-amylase-like 2 0.0
unknown
biog3_v1.0_unigene3289 biogeco3 v1.0 345
AutoFact: Mannan endo-1,4-beta-mannosidase 2 n=2 Tax=Arabidopsis RepID=MAN2_ARATH 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: mannan endo- -beta-mannosidase 2-like 0.0
Internal
biog3_v1.0_unigene3346 biogeco3 v1.0 839
AutoFact: heteroglycan glucosidase 1 [Arabidopsis thaliana] ref|NP_001118685.1| heteroglycan glucosidase 1 [Arabidopsis thaliana] gb|AAL24303.1| alpha glucosidase-like protein [Arabidopsis thaliana] gb|AAO00865.1| Unknown protein [Arabidopsis thaliana] gb|AAP68250. 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: alpha glucosidase-like protein 0.0
Internal

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain