Sustainpine_db
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Assembly Name: biogeco3 v1.0

Name: transcription, DNA-dependent

Term: GO:0006351  Help

Source: GO from Blast2go

Ontology: Biological Process

UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
 Full-Length
biog3_v1.0_unigene19000 biogeco3 v1.0 160
• AutoFact: WRKY transcription factor PmWRKY115 (Fragment) n=3 Tax=Pinus monticola RepID=E6Y3E7_PINMO 0.0
• Blast2go: wrky transcription factor 0.0
unknown
biog3_v1.0_unigene20264 biogeco3 v1.0 293
• AutoFact: Actin related protein n=2 Tax=Malpighiales RepID=B9I2R4_POPTR 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: actin-related protein 0.0
Putative N-terminus
biog3_v1.0_unigene20744 biogeco3 v1.0 265
• AutoFact: Zinc finger protein, putative n=1 Tax=Ricinus communis RepID=B9SC24_RICCO 0.0
• Blast2go: protein 0.0
Coding
biog3_v1.0_unigene20807 biogeco3 v1.0 246
• AutoFact: Zinc finger-homeodomain protein 2 n=1 Tax=Saruma henryi RepID=B0LK13_SARHE 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: zf-hd homeobox protein at4g24660-like 0.0
Internal
biog3_v1.0_unigene21134 biogeco3 v1.0 282
• AutoFact: protein kinase domain-containing protein [Arabidopsis thaliana] gb|AAM19803.1| At1g74320/F1O17_1 [Arabidopsis thaliana] gb|AAM98234.1| putative choline kinase [Arabidopsis thaliana] gb|AAP42750.1| At1g74320 [Arabidopsis thaliana] gb|AEE35577.1| protein ki 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: choline ethanolamine kinase 0.0
Internal
biog3_v1.0_unigene21176 biogeco3 v1.0 443
• AutoFact: Short-root n=1 Tax=Pinus radiata RepID=B4XI11_PINRA 0.0
• FL-Next: tr=Short-root; Pinus radiata (Monterey pine) (Pinus insignis). 0.0
• Blast2go: gras family transcription factor 0.0
Internal
biog3_v1.0_unigene21193 biogeco3 v1.0 328
• AutoFact: GC-rich sequence DNA-binding factor-like protein with Tuftelin interacting domain [Arabidopsis thaliana] ref|NP_001078041.1| GC-rich sequence DNA-binding factor-like protein with Tuftelin interacting domain [Arabidopsis thaliana] gb|AAD23716.1| hypothetic 0.0
• FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
• Blast2go: protein 0.0
Internal
biog3_v1.0_unigene21296 biogeco3 v1.0 418
• AutoFact: DNA binding / DNA-directed RNA polymerase [Arabidopsis thaliana] dbj|BAA97230.1| unnamed protein product [Arabidopsis thaliana] gb|AAQ89628.1| At5g23710 [Arabidopsis thaliana] gb|AED93201.1| DNA binding / DNA-directed RNA polymerase [Arabidopsis thaliana] 8.0e-16
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: dna-directed rna polymerase iii subunit rpc6-like 0.0
Putative C-terminus
biog3_v1.0_unigene21425 biogeco3 v1.0 213
• AutoFact: RNA polymerase n=1 Tax=Elaeis guineensis RepID=B3TLS5_ELAGV 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: dna-directed rna polymerases and iii kda polypeptide 0.0
N-terminus
biog3_v1.0_unigene21777 biogeco3 v1.0 293
• AutoFact: Actin related protein n=2 Tax=Malpighiales RepID=B9I2R4_POPTR 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: actin-related protein 0.0
Internal
biog3_v1.0_unigene22665 biogeco3 v1.0 297
• AutoFact: Bel1 homeotic protein, putative n=1 Tax=Ricinus communis RepID=B9SDI4_RICCO 0.0
• Blast2go: bel1 homeotic 0.0
unknown
biog3_v1.0_unigene22693 biogeco3 v1.0 334
• AutoFact: TPA_inf: class IV HD-Zip protein HDZ41 [Physcomitrella patens] 0.0
• FL-Next: tr=Homeodomain protein HB2; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Blast2go: homeodomain protein 0.0
C-terminus
biog3_v1.0_unigene22803 biogeco3 v1.0 428
• AutoFact: DNA-directed RNA polymerase (Fragment) n=1 Tax=Vitis vinifera RepID=D7TX75_VITVI 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: dna-directed rna polymerase i subunit rpa2 0.0
Putative Complete
biog3_v1.0_unigene23003 biogeco3 v1.0 274
• AutoFact: TPA_inf: class IV HD-Zip protein HDZ41 [Physcomitrella patens] 0.0
• FL-Next: tr=Homeodomain protein HB2; Picea abies (Norway spruce) (Picea excelsa). 0.0
• Blast2go: homeodomain protein 0.0
Internal
biog3_v1.0_unigene23059 biogeco3 v1.0 217
• AutoFact: sequence-specific DNA binding transcription factor [Arabidopsis thaliana] gb|AAM13041.1| unknown protein [Arabidopsis thaliana] gb|AAO30091.1| unknown protein [Arabidopsis thaliana] gb|AEE76088.1| sequence-specific DNA binding transcription factor [Arabid 0.0
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: dna binding 0.0
Internal
biog3_v1.0_unigene23142 biogeco3 v1.0 242
• AutoFact: homeodomain protein HB2 [Populus tomentosa] 0.0
• Blast2go: protein 0.0
Coding
biog3_v1.0_unigene23221 biogeco3 v1.0 278
• AutoFact: CTP_transf_2 domain containing protein 2.0e-09
• FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
• Blast2go: phosphopantetheine adenylyltransferase 0.0
Internal
biog3_v1.0_unigene23341 biogeco3 v1.0 145
• AutoFact: Zinc finger protein, putative n=1 Tax=Ricinus communis RepID=B9SC24_RICCO 0.0
• Blast2go: protein 0.0
unknown
biog3_v1.0_unigene23438 biogeco3 v1.0 140
• AutoFact: Transcriptional factor B3; Auxin response factor [Medicago truncatula] 0.0
• FL-Next: tr=ARF-L1 protein; Ginkgo biloba (Ginkgo) (Maidenhair tree). 0.0
• Blast2go: auxin response 0.0
Internal
biog3_v1.0_unigene23651 biogeco3 v1.0 342
• AutoFact: heat shock factor protein hsf8-related [Glycine max] 0.0
• Blast2go: heat shock transcription factor 1 0.0
Coding

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain