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Assembly Name: biogeco3 v1.0

Name: nucleosome assembly

Term: GO:0006334  Help

Source: GO from Blast2go

Ontology: Biological Process


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog3_v1.0_unigene101 biogeco3 v1.0 632
AutoFact: DNA-binding protein PcMYB1, putative [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: telomere repeat binding factor 1 0.0
Putative N-terminus
biog3_v1.0_unigene568 biogeco3 v1.0 332
AutoFact: ATPase splayed [Arabidopsis thaliana] gb|AEC08101.1| ATPase splayed [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: atpase splayed 0.0
Internal
biog3_v1.0_unigene711 biogeco3 v1.0 660
AutoFact: Histone H2B.2 n=33 Tax=Spermatophyta RepID=H2B2_SOLLC 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone h2b 0.0
C-terminus
biog3_v1.0_unigene1419 biogeco3 v1.0 926
AutoFact: transducin/WD40 domain-containing protein [Arabidopsis thaliana] dbj|BAA77766.1| FAS2 [Arabidopsis thaliana] dbj|BAB11430.1| FAS2 [Arabidopsis thaliana] gb|AED97930.1| transducin/WD40 domain-containing protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: transducin wd40 domain-containing protein 0.0
C-terminus
biog3_v1.0_unigene1615 biogeco3 v1.0 181
AutoFact: Histone H2A n=1 Tax=Picea sitchensis RepID=A9NXR7_PICSI 2.0e-36
Blast2go: histone h2a 1.71538e-38
unknown
biog3_v1.0_unigene2580 biogeco3 v1.0 497
AutoFact: pfam00956, NAP, Nucleosome assembly protein (NAP) 0.0
Blast2go: protein set 0.0
unknown
biog3_v1.0_unigene3522 biogeco3 v1.0 815
AutoFact: PREDICTED: similar to Late histone H2A.2.2 n=2 Tax=Hydra magnipapillata RepID=UPI0001924B8D 3.0e-38
FL-Next: sp=Histone H4; Picea abies (Norway spruce) (Picea excelsa). 0.0
Blast2go: histone h4 0.0
Complete
biog3_v1.0_unigene6809 biogeco3 v1.0 714
AutoFact: Histone H2A n=1 Tax=Picea sitchensis RepID=A9NXR7_PICSI 2.0e-36
FL-Next: sp=Histone H2A; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone h2a 1.71538e-38
Complete
biog3_v1.0_unigene7067 biogeco3 v1.0 433
AutoFact: Histone H3 n=1 Tax=Physcomitrella patens subsp. patens RepID=A9U534_PHYPA 2.0e-24
FL-Next: tr=Histone 3; Picea abies (Norway spruce) (Picea excelsa). 0.0
Blast2go: cenh3 1.87561e-29
C-terminus
biog3_v1.0_unigene8378 biogeco3 v1.0 403
AutoFact: histone H4 [Hyacinthus orientalis] 4.0e-38
FL-Next: sp=Histone H4; Picea abies (Norway spruce) (Picea excelsa). 0.0
Blast2go: histone h4 0.0
Putative Complete
biog3_v1.0_unigene10156 biogeco3 v1.0 451
AutoFact: transducin/WD40 domain-containing protein [Arabidopsis thaliana] dbj|BAA77766.1| FAS2 [Arabidopsis thaliana] dbj|BAB11430.1| FAS2 [Arabidopsis thaliana] gb|AED97930.1| transducin/WD40 domain-containing protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: transducin wd40 domain-containing protein 0.0
Internal
biog3_v1.0_unigene12134 biogeco3 v1.0 913
AutoFact: pfam00956, NAP, Nucleosome assembly protein (NAP) 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein set 0.0
Complete
biog3_v1.0_unigene15326 biogeco3 v1.0 157
AutoFact: pfam00956, NAP, Nucleosome assembly protein (NAP) 0.0
Blast2go: protein set 0.0
unknown
biog3_v1.0_unigene23443 biogeco3 v1.0 192
AutoFact: Histone H2B.2 n=33 Tax=Spermatophyta RepID=H2B2_SOLLC 0.0
Blast2go: histone h2b 0.0
unknown
biog3_v1.0_unigene25990 biogeco3 v1.0 226
AutoFact: Histone H2A n=8 Tax=Picea sitchensis RepID=A9P2B3_PICSI 9.0e-26
FL-Next: sp=Histone H2A; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone h2a 1.93918e-30
N-terminus
biog3_v1.0_unigene26537 biogeco3 v1.0 248
AutoFact: Histone H2B.2 n=33 Tax=Spermatophyta RepID=H2B2_SOLLC 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: histone h2b 0.0
Putative C-terminus

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain