Sustainpine_db
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Assembly Name: biogeco3 v1.0

Name: binding

Term: GO:0005488  Help

Source: GO from Blast2go

Ontology: Molecular Function


UniGenes with this annotation:

Sequence Assembly Length (nt)
DescriptionE-value
Full-Length
biog3_v1.0_unigene9 biogeco3 v1.0 290
AutoFact: RNA-binding protein MEI2, putative; 36123-32976 [Arabidopsis thaliana] 0.0
Blast2go: protein mei2-like 2-like 0.0
unknown
biog3_v1.0_unigene61 biogeco3 v1.0 931
AutoFact: 6-phosphogluconate dehydrogenase NAD-binding domain-containing protein [Musa acuminata] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
N-terminus
biog3_v1.0_unigene123 biogeco3 v1.0 918
AutoFact: Glycerol kinase n=1 Tax=Pandanus amaryllifolius RepID=Q6RJ33_9LILI 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: glycerol kinase 0.0
N-terminus
biog3_v1.0_unigene154 biogeco3 v1.0 484
AutoFact: HAT family dimerisation domain containing protein n=2 Tax=Oryza sativa RepID=Q2R1C3_ORYSJ 0.0
FL-Next: tr=Putative uncharacterized protein Sb02g011180; Sorghum bicolor (Sorghum) (Sorghum vulgare). 0.0
Blast2go: uncharacterized protein loc100780312 0.0
Internal
biog3_v1.0_unigene181 biogeco3 v1.0 469
AutoFact: Eukaryotic translation initiation factor 3 subunit, putative n=1 Tax=Ricinus communis RepID=B9RHH9_RICCO 0.0
FL-Next: tr=Eukaryotic translation initiation factor 3 subunit, putative; Ricinus communis (Castor bean). 0.0
Blast2go: tetratricopeptide repeat -containing protein 0.0
Internal
biog3_v1.0_unigene182 biogeco3 v1.0 641
AutoFact: Whole genome shotgun sequence of line PN40024, scaffold_4.assembly12x (Fragment) n=2 Tax=Vitis vinifera RepID=D7SKR3_VITVI 6.0e-30
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: ccr4-not transcription complex subunit 2.67825e-33
Internal
biog3_v1.0_unigene254 biogeco3 v1.0 1136
AutoFact: PREDICTED: similar to splicing factor, putative n=1 Tax=Vitis vinifera RepID=UPI0001983CB2 0.0
FL-Next: tr=Splicing factor 3B subunit, putative; Ricinus communis (Castor bean). 0.0
Blast2go: splicing factor 3b subunit 1-like 0.0
Internal
biog3_v1.0_unigene286 biogeco3 v1.0 728
AutoFact: Mitochondrial carrier protein [Ribes nigrum] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: mitochondrial carrier 0.0
N-terminus
biog3_v1.0_unigene321 biogeco3 v1.0 894
AutoFact: Zeta carotene desaturase n=2 Tax=Daucus carota subsp. sativus RepID=Q2VER6_DAUCA 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: zeta-carotene desaturase 0.0
Internal
biog3_v1.0_unigene376 biogeco3 v1.0 601
AutoFact: transducin/WD40 domain-containing protein [Arabidopsis thaliana] gb|AEE82568.1| transducin/WD40 domain-containing protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Blast2go: transducin wd40 domain-containing protein 0.0
Internal
biog3_v1.0_unigene428 biogeco3 v1.0 1355
AutoFact: adenine nucleotide transporter 1 [Arabidopsis thaliana] gb|AAK25878.1|AF360168_1 putative carrier protein [Arabidopsis thaliana] gb|AAL06538.1|AF412085_1 AT4g01100/F2N1_16 [Arabidopsis thaliana] gb|AAB61037.1| similar to mitochondrial carrier family [Arab 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: grave disease carrier 0.0
Complete
biog3_v1.0_unigene449 biogeco3 v1.0 800
AutoFact: RING/FYVE/PHD zinc finger-containing protein [Arabidopsis thaliana] sp|Q9FMS5.1|MS1_ARATH RecName: Full=PHD finger protein MALE STERILITY 1 dbj|BAB08324.1| unnamed protein product [Arabidopsis thaliana] gb|AED93002.1| RING/FYVE/PHD zinc finger-containing 0.0
FL-Next: sp=PHD finger protein MALE STERILITY 1; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: dna binding 0.0
Internal
biog3_v1.0_unigene581 biogeco3 v1.0 502
AutoFact: uncharacterized protein [Arabidopsis thaliana] gb|AAG50632.1|AC083835_17 defective chloroplasts and leaves (DCL) protein, putative [Arabidopsis thaliana] gb|AAM91086.1| At1g45261/F2G19.1 [Arabidopsis thaliana] gb|AAT41860.1| At1g45261 [Arabidopsis thalian 3.0e-35
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: uncharacterized protein 9.80909e-44
C-terminus
biog3_v1.0_unigene613 biogeco3 v1.0 416
AutoFact: F-box protein [Arabidopsis thaliana] sp|Q94C27.1|FB84_ARATH RecName: Full=F-box protein At1g70590 gb|AAK59789.1| At1g70590/F5A18_23 [Arabidopsis thaliana] gb|AAO11593.1| At1g70590/F5A18_23 [Arabidopsis thaliana] gb|AEE35086.1| F-box protein [Arabidopsis t 0.0
FL-Next: sp=F-box protein At1g70590; Arabidopsis thaliana (Mouse-ear cress). 0.0
Blast2go: f-box protein 0.0
C-terminus
biog3_v1.0_unigene616 biogeco3 v1.0 583
AutoFact: armadillo/beta-catenin-like repeat-containing protein [Arabidopsis thaliana] dbj|BAB09724.1| importin beta [Arabidopsis thaliana] gb|AED96362.1| armadillo/beta-catenin-like repeat-containing protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: protein 0.0
Internal
biog3_v1.0_unigene648 biogeco3 v1.0 420
AutoFact: 4-alpha-glucanotransferase, putative n=1 Tax=Ricinus communis RepID=B9SCF0_RICCO 1.0e-21
FL-Next: sp=4-alpha-glucanotransferase DPE2; Oryza sativa subsp. japonica (Rice). 0.0
Blast2go: 4-alpha-glucanotransferase dpe2-like 4.12254e-24
N-terminus
biog3_v1.0_unigene660 biogeco3 v1.0 826
AutoFact: symplekin [Arabidopsis thaliana] dbj|BAF00598.1| hypothetical protein [Arabidopsis thaliana] gb|AEE30851.1| symplekin [Arabidopsis thaliana] 0.0
FL-Next: tr=Putative uncharacterized protein; Vitis vinifera (Grape). 0.0
Blast2go: uncharacterized protein loc100788861 0.0
C-terminus
biog3_v1.0_unigene680 biogeco3 v1.0 929
AutoFact: phenylalanyl-tRNA synthetase alpha chain [Arabidopsis thaliana] sp|Q9T034.3|SYFA_ARATH RecName: Full=Probable phenylalanyl-tRNA synthetase alpha chain; AltName: Full=Phenylalanine--tRNA ligase alpha chain; Short=PheRS gb|AAM19830.1| AT4g39280/T22F8_180 [A 0.0
FL-Next: tr=Putative uncharacterized protein; Picea sitchensis (Sitka spruce) (Pinus sitchensis). 0.0
Blast2go: phenylalanyl-trna synthetase alpha chain 0.0
C-terminus
biog3_v1.0_unigene688 biogeco3 v1.0 433
AutoFact: transducin/WD40 domain-containing protein [Arabidopsis thaliana] gb|AEE82568.1| transducin/WD40 domain-containing protein [Arabidopsis thaliana] 0.0
FL-Next: tr=Predicted protein; subsp. trichocarpa). 0.0
Blast2go: transducin wd40 domain-containing protein 0.0
C-terminus
biog3_v1.0_unigene787 biogeco3 v1.0 419
AutoFact: Unassigned protein
Blast2go: protein xri1 3.42395e-32
Putative coding

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Biología Molecular y Biotecnología de Plantas, Facultad de Ciencias y Plataforma Andaluza de Bioinformática, Universidad de Málaga, E-29071 Málaga, Spain